BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11630 (UTR included)
(1498 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_619_C1 143 9e-34
BF01042A1B12 86 2e-16
>BF14_619_C1
Length = 793
Score = 143 bits (72), Expect = 9e-34
Identities = 132/152 (86%), Gaps = 5/152 (3%)
Strand = Plus / Plus
Query: 555 aagacgaggcaccgtttcatacacgtcgctccgttgttctgccgtcggggggcgtcatac 614
||||||||| ||||||| ||| |||||||||| ||||||||||||||||||||||| |
Sbjct: 16 aagacgaggtcccgtttcttacgcgtcgctccggcgttctgccgtcggggggcgtcatgc 75
Query: 615 attcccatcacccaatgccatcc-----tccccttcaacgacgatctaagccgaggtccg 669
| ||||||| || ||||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 76 aatcccatcttccgatgccatcccccactccacttcaacgacgtactaagccgaggtccg 135
Query: 670 gcctcttagaggcacccttgggactggcgtat 701
|||||||||||||||||||||||| |||||||
Sbjct: 136 gcctcttagaggcacccttgggacgggcgtat 167
>BF01042A1B12
Length = 787
Score = 85.7 bits (43), Expect = 2e-16
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 616 ttcccatcacccaatgccatcctccccttcaacgacgatctaagccgaggtccggcctct 675
||||||||||| |||||||||||||||||||||||| || ||| ||| || ||||| |
Sbjct: 644 ttcccatcacctgatgccatcctccccttcaacgacg-tcctagctgagatctggccttt 586
Query: 676 tagaggcacccttgggactggcgtatc 702
|||||||||||||||||| ||||||||
Sbjct: 585 tagaggcacccttgggacgggcgtatc 559
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 112,445
Number of extensions: 1567
Number of successful extensions: 1567
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1565
Number of HSP's successfully gapped: 2
Length of query: 1498
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1481
Effective length of database: 8,119,229
Effective search space: 12024578149
Effective search space used: 12024578149
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)