BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11633 (UTR included)
(1378 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1G09 196 7e-50
BF01037B1H08 131 3e-30
BF01031B1E12 131 3e-30
BF01056B1D02 129 1e-29
BF01023A2A12 119 1e-26
BF01052B1H02 115 2e-25
BF01010B2F09 90 1e-17
BF01062A1A05 88 4e-17
>BF01040A1G09
Length = 753
Score = 196 bits (99), Expect = 7e-50
Identities = 112/115 (97%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 1 tttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatg 60
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26 tttgaaatcgccaacccatcttgagcaagcgtggcgattaatgcttaaaccttctccatg 85
Query: 61 cgagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatga 115
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 86 cgagaagaggcttatgctcagcagt-ggcttccgataggctgatgatgatgatga 139
>BF01037B1H08
Length = 758
Score = 131 bits (66), Expect = 3e-30
Identities = 109/122 (89%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 2 ttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatgc 61
|||||||||||| |||||||||||||||||||| | ||||||||| |||||||| ||||
Sbjct: 239 ttgaaatcgccaccccgtcttgagcaagcgtggtgcttaatgctctaaccttctacatgt 298
Query: 62 gagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatgatgaaaa 121
|||||||||| | |||||||| |||||| ||||||||||||||| ||||||| || ||||
Sbjct: 299 gagaagaggcctttgctcagctgtgggc-tccgataggctgatggtgatgataataaaaa 357
Query: 122 aa 123
||
Sbjct: 358 aa 359
>BF01031B1E12
Length = 730
Score = 131 bits (66), Expect = 3e-30
Identities = 101/110 (91%), Gaps = 2/110 (1%)
Strand = Plus / Plus
Query: 2 ttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatgc 61
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 109 ttgaaatcgccaacccgtcttgagcaagcgtggtgattaatgctctaaccttctccgtgt 168
Query: 62 gagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatg 111
|||||| || || ||||||||||||||| ||||||||||| |||||||||
Sbjct: 169 gagaaggggatt-tgctcagcagtgggc-tccgataggcttatgatgatg 216
>BF01056B1D02
Length = 778
Score = 129 bits (65), Expect = 1e-29
Identities = 104/115 (90%), Gaps = 4/115 (3%)
Strand = Plus / Plus
Query: 2 ttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatgc 61
||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||
Sbjct: 636 ttgaaatcgccaacccgtcttgagcaagcgtggtggttaatgctctaacctt---catgt 692
Query: 62 gagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatgat 116
|||||||||| | ||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 693 gagaagaggcctttgctcagcagtgggc-tccgataggctgatgataatgatgat 746
>BF01023A2A12
Length = 723
Score = 119 bits (60), Expect = 1e-26
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 tttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatg 60
||||||||| |||| | | ||||||| ||||||| ||||||||||| |||||||||||||
Sbjct: 234 tttgaaatcaccaatcagccttgagcgagcgtggtgattaatgctctaaccttctccatg 293
Query: 61 cgagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatgat 116
|| ||||||| | |||||||||||| || ||||||||||||||||||||||||||
Sbjct: 294 tgataagaggcctttgctcagcagtgagc-tccgataggctgatgatgatgatgat 348
>BF01052B1H02
Length = 790
Score = 115 bits (58), Expect = 2e-25
Identities = 104/118 (88%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 1 tttgaaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatg 60
|||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||||
Sbjct: 377 tttgaaatcgccaacccgtcttgagcaagcgtggtgcttaatgctctaactttctccatg 318
Query: 61 cgagaagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatgatga 118
||||| |||| | |||||| |||||||| || ||| |||| |||||| |||||||||
Sbjct: 317 ggagaaaaggcgtttgctcaacagtgggc-tctgatgggctaatgatggtgatgatga 261
>BF01010B2F09
Length = 764
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/111 (86%), Gaps = 4/111 (3%)
Strand = Plus / Minus
Query: 5 aaatcgccaacccgtcttgagcaagcgtggcgattaatgctcaaaccttctccatgcgag 64
|||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||| |||
Sbjct: 366 aaatcgccaatccgtcttgagcgagcgtggtgattaatgctctaaccttctccatgtgag 307
Query: 65 aagaggcttatgctcagcagtgggcttccgataggctgatgatgatgatga 115
|||| || | |||||| | |||| ||||| |||||| ||||||||||||
Sbjct: 306 aagacgcct---ctcagcggcgggc-tccgacaggctggtgatgatgatga 260
>BF01062A1A05
Length = 777
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 19 tcttgagcaagcgtggcgattaatgctcaaaccttctccatgcgagaagaggcttatgct 78
|||||||||||||||| ||||||||||| |||||||||| || |||||||||| | ||||
Sbjct: 513 tcttgagcaagcgtggtgattaatgctctaaccttctccttgtgagaagaggcctttgct 572
Query: 79 cagcagtgggct 90
|||||||||||
Sbjct: 573 tagcagtgggct 584
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,345
Number of extensions: 20885
Number of successful extensions: 20885
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 20874
Number of HSP's successfully gapped: 8
Length of query: 1378
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1361
Effective length of database: 8,119,229
Effective search space: 11050270669
Effective search space used: 11050270669
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)