BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11643 (UTR included)
(1807 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 145 3e-34
BF01049B1F01 119 2e-26
BF14_335_C2 113 1e-24
BF14_335_C4 111 4e-24
BF01031B2E06 98 6e-20
BF01016A2B02 96 2e-19
BF01016B1E06 94 9e-19
BF01044B2F11 80 1e-14
BF01044B1A07 80 1e-14
BF01014B2F02 80 1e-14
BF14_335_C5 80 1e-14
BF01056B2D01 74 9e-13
BF01045B1A06 68 5e-11
>BF01019A1H08
Length = 504
Score = 145 bits (73), Expect = 3e-34
Identities = 91/97 (93%)
Strand = Plus / Minus
Query: 812 agataggagccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcct 871
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 490 agataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcct 431
Query: 872 ctccctgcaacgtgacggacccgccatccgtacggtg 908
|||||||||||| || ||||||| || ||| ||||||
Sbjct: 430 ctccctgcaacgcgatggacccggcacccgcacggtg 394
>BF01049B1F01
Length = 840
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 820 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgc 879
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgc 591
Query: 880 aacg 883
||||
Sbjct: 590 aacg 587
>BF14_335_C2
Length = 1827
Score = 113 bits (57), Expect = 1e-24
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 824 cttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 883
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 884 tgacggacccgccatccgtacggtg 908
| |||||||| || ||| ||||||
Sbjct: 862 cggcggacccggcacccgcacggtg 838
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 700 ttccttgggaaaccaacatccctaaagaccacgccatcgaggtcaacaaatattacgaac 759
|||||||| | ||||||||||| ||| |||| |||||| |||||||||| ||||| || |
Sbjct: 1223 ttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagc 1164
Query: 760 tcactaagaatatgttcgt 778
|||||| ||||| ||||||
Sbjct: 1163 tcactaggaataggttcgt 1145
>BF14_335_C4
Length = 1491
Score = 111 bits (56), Expect = 4e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 820 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
>BF01031B2E06
Length = 707
Score = 97.6 bits (49), Expect = 6e-20
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 708 gaaaccaacatccctaaagaccacgccatcgaggtcaacaaatattacgaa-ctcactaa 766
|||||||||||||| |||||||| |||||| || |||| || ||||||||| ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Query: 767 gaatatgttcgttgtaaatttgtacgcgtcagaagtaggagcgag 811
||||| |||||| | ||||||||||||| |||||| ||||||||
Sbjct: 496 gaataggttcgtggcaaatttgtacgcggtagaagtgggagcgag 540
>BF01016A2B02
Length = 780
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 812 agataggagccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcct 871
||||||| ||| ||||| |||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 295 agataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagctcct 236
Query: 872 ctccctgcaacg 883
|||||| |||||
Sbjct: 235 ctcccttcaacg 224
>BF01016B1E06
Length = 606
Score = 93.7 bits (47), Expect = 9e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 820 gccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgc 879
|||||||||||||||||||||||||| | |||| ||||||||||||||||||||| ||||
Sbjct: 255 gccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgc 196
Query: 880 aac 882
|||
Sbjct: 195 aac 193
>BF01044B2F11
Length = 728
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 812 agataggagccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcct 871
||||||| ||| |||||||||||||||| | |||||||||||| |||| |||||||||
Sbjct: 637 agataggggccacttaaacctacacctgaattgcaagtcccaggtgctgtcgaagctcct 696
Query: 872 ctccctgcaacg 883
||||||||||||
Sbjct: 697 ctccctgcaacg 708
>BF01044B1A07
Length = 806
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 833 acacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacgtgacggacc 892
|||||||| |||| |||||||| ||| |||||||||||||||||||| ||| || |||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 893 cgccatccgtacggtg 908
||||| ||| ||||||
Sbjct: 472 cgccacccgcacggtg 457
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 832 tacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 883
|||||||||||||||||||| |||| ||| ||||||||||||||||||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacg 572
>BF14_335_C5
Length = 1597
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 823 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 881
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa 1556
>BF01056B2D01
Length = 728
Score = 73.8 bits (37), Expect = 9e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 848 gtcccaggcactgttgaagctcctctccctgcaacgtgacggacccgccatccgtacggt 907
||||||||| |||||||||||||||||||||||| |||| ||||||| || ||| |||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 908 g 908
|
Sbjct: 106 g 106
>BF01045B1A06
Length = 820
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 845 caagtcccaggcactgttgaagctcctctccctgcaac 882
||||||| ||||||||||||||||||||||||||||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaac 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,548
Number of extensions: 5081
Number of successful extensions: 5081
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 5080
Number of HSP's successfully gapped: 14
Length of query: 1807
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1790
Effective length of database: 8,119,229
Effective search space: 14533419910
Effective search space used: 14533419910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)