BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11645 (UTR included)
(1882 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2A02 1562 0.0
BF01018B2A11 250 7e-66
BF01016B1A11 228 3e-59
BF01056B1D01 190 6e-48
BF01030A2C06 145 3e-34
BF01059A2E06 88 6e-17
>BF01062B2A02
Length = 859
Score = 1562 bits (788), Expect = 0.0
Identities = 809/818 (98%)
Strand = Plus / Plus
Query: 562 ctttagataagaaaaaaagagtgagaaatgacaaccctgaagatataacgggattcctcg 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctttagataagaaaaaaagagtgagaaatgacaaccctgaagatataacgggattcctcg 72
Query: 622 gtccctggggtggatatgaaggagaaaagagaatattaaaaccagaaggcgacgaagcaa 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gtccctggggtggatatgaaggagaaaagagaatattaaaaccagaaggcgacgaagcaa 132
Query: 682 aggaaatcgaagaaattctagcaaagagacagaagaaagggaagattgttgatgatcagc 741
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 133 aggaaatcgaagaaattctagcaaagagacagaagaaagggaaggttgttgatgatcagc 192
Query: 742 ctttggaggagaaatctatattccatattgacaaaggaacggattatatgggccgatcct 801
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 193 ctttggaggagaaatctatattccatattgacaaaggaacggattatatgggtcgatcct 252
Query: 802 ggattgaggctccgagaagtgaaacacaattacgcagtgacacaccaccagacaaatgtt 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggattgaggctccgagaagtgaaacacaattacgcagtgacacaccaccagacaaatgtt 312
Query: 862 tcctaccgaaagctcatatattcacgtggaagggtcacaccaagggtgtgtccgctgttc 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcctaccgaaagctcatatattcacgtggaagggtcacaccaagggtgtgtccgctgttc 372
Query: 922 gttggtttcctcgtacagctcacctcatgttgtcagccgctatggattgcagggcaaaga 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gttggtttcctcgtacagctcacctcatgttgtcagccgctatggattgcagggcaaaga 432
Query: 982 tctgggaggtgtatggtgatcgtcgttgtataagaacatactttggtcacagacaggcgg 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctgggaggtgtatggtgatcgtcgttgtataagaacatactttggtcacagacaggcgg 492
Query: 1042 ttagagatgtcaacttcaataacactggcacacatttcttgtcagctgcatatgatcgat 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttagagatgtcaacttcaataacactggcacacatttcttgtcagctgcatatgatcgat 552
Query: 1102 acatcaagttatgggacacggagaccggtgactgtgtgtcccggttcacctccaggaagg 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acatcaagttatgggacacggagaccggtgactgtgtgtcccggttcacctccaggaagg 612
Query: 1162 tcccgtactgtgtgaagttcaacccggacgaggacaaacaacacctcatcgttgccggaa 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcccgtactgtgtgaagttcaacccggacgaggacaaacaacacctcatcgttgccggaa 672
Query: 1222 cctcagataaaaaaattatatgttgggacactcgtagcggtgagatagttcaggagtatg 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cctcagataaaaaaattatatgttgggacactcgtagcggtgagatagttcaggagtatg 732
Query: 1282 accgtcacctgggcgctgtcaacactatcaccttcgtggatgacaacagacgcttcgtca 1341
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 accgtcacctnnncgctgtcaacactatcaccttcgtggatgacaacagacgcttcgtca 792
Query: 1342 ccacctccgacgacaaaagtctaagggtctgggagtgg 1379
|||||||||||||||||||||| ||||||||||||
Sbjct: 793 ccacctccgacgacaaaagtctgnnngtctgggagtgg 830
>BF01018B2A11
Length = 733
Score = 250 bits (126), Expect = 7e-66
Identities = 262/306 (85%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 50 aatatatggtggaattgtgtatcttatataggtctatagaaaagtctgcgttggcatatg 109
|||| ||||||||||||||||| ||||| || |||| |||||| || ||| | ||||||
Sbjct: 719 aataaatggtggaattgtgtattttataaagatctacagaaaaatccgcggtaacatatg 660
Query: 110 tctataccttaaagaaaacatactataaccattttacaacttctaaaaattggcattcct 169
|| ||||||||| || ||||| ||||| |||||||||| | ||||||||| || ||||
Sbjct: 659 tccataccttaaggataacatgctatataaattttacaacatttaaaaattgtcactcct 600
Query: 170 aaagcttttattggaaaactatttacataaatacggtttaagtcttatcaaaacaaatta 229
||||||||||||||||| ||||||| ||| | ||||| | | |||||| |||| |||||
Sbjct: 599 aaagcttttattggaaagctatttatatatacacggtattaatcttatgaaaatgaatta 540
Query: 230 cttcgttttcaagcctacatcagtatctgtaaattactttttaaatca-ttaaaacgggc 288
|||||||||||||||||||||| | ||| ||||||||||||||||||| ||||| |||||
Sbjct: 539 cttcgttttcaagcctacatcactttctttaaattactttttaaatcatttaaatcgggc 480
Query: 289 gtcccatttgaaagttatcataatataagtttcataattctcaaaattaaataggctatt 348
|| || |||||||| ||||||||||||| ||| | ||| ||||||||||||||||| |||
Sbjct: 479 gtaccgtttgaaaggtatcataatataaatttaaaaatgctcaaaattaaataggccatt 420
Query: 349 ttatat 354
||||||
Sbjct: 419 ttatat 414
>BF01016B1A11
Length = 786
Score = 228 bits (115), Expect = 3e-59
Identities = 209/237 (88%), Gaps = 5/237 (2%)
Strand = Plus / Minus
Query: 1 agagcttttaacgaaaacactgccttaagtctttgagat---ataaaaaaaaaatatatg 57
|||||||||||||||||| |||||| ||| ||||||||| |||| |||| |||||||
Sbjct: 393 agagcttttaacgaaaacgctgcctaaagcctttgagattgtataacaaaataatatatc 334
Query: 58 gtggaattgtgtatcttatataggtctatagaaaagtctgcgttggcatatgtctatacc 117
|||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 333 gtggaattgtgtatcttatataggtctacagaaaagtccgcggtggcatatgtctatacc 274
Query: 118 ttaaagaaaacatacta-taaccattttacaacttctaaaaattggcattcctaaagctt 176
|||| || ||||||||| || || ||||||||| ||||||| |||||||||||| |
Sbjct: 273 ttaaggataacatactactactaatcttacaacttataaaaatcttcattcctaaagcgt 214
Query: 177 ttattggaaaactatttacataaatacgg-tttaagtcttatcaaaacaaattactt 232
|||||||||| |||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 213 ttattggaaagctatttacataaatacggcattaagtcttatcaaaataaattactt 157
Score = 143 bits (72), Expect = 1e-33
Identities = 125/140 (89%), Gaps = 2/140 (1%)
Strand = Plus / Minus
Query: 259 taaattactttttaaatcattaaaa-cgggcgtcccatttgaaagttatcataatataag 317
||||||||||||||||||||| ||| | ||||| |||||||||||||||||| |||||||
Sbjct: 166 taaattactttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataag 107
Query: 318 tttcataattctcaaaattaaataggctattttatatttttttgtaaaaagaccgtgcga 377
||| ||||||||||||||||||||||||||||||||| |||| |||| | ||||||||
Sbjct: 106 tttagtaattctcaaaattaaataggctattttatatt-ttttctaaagtgcccgtgcga 48
Query: 378 agccagggctagtacttagt 397
|||| ||||| |||| ||||
Sbjct: 47 agccggggctggtacctagt 28
>BF01056B1D01
Length = 838
Score = 190 bits (96), Expect = 6e-48
Identities = 302/369 (81%), Gaps = 25/369 (6%)
Strand = Plus / Minus
Query: 13 gaaaacactgccttaagtctttgagatataaaaaaaaaatatatggtggaattgtgtatc 72
|||||| |||||||||||||||||| ||||| |||| ||||| ||| |||||| ||||||
Sbjct: 683 gaaaacgctgccttaagtctttgaggtataacaaaataatatttggcggaattttgtatc 624
Query: 73 ttatataggtctatagaaaagtctgcgttggcatatgtctataccttaaagaaaacatac 132
|||||||| |||| |||||||| || ||||||||||||||||||||| || ||||||
Sbjct: 623 ttatatagatctacagaaaagttcccgatggcatatgtctataccttaaggattacatac 564
Query: 133 tataaccattttacaacttctaaaaattggcattcctaaagcttttattggaaaactatt 192
|||| |||||| ||| || |||||||||||| | ||| ||||||||||| |||||
Sbjct: 563 tatatacattttccaagttttaaaaattggcaat---aaacgctttattggaaagctatt 507
Query: 193 tacataaatacggtt-taagtcttatcaaaacaaat-tactt----------------cg 234
|||||||||||||| ||||| || |||||| ||| || || ||
Sbjct: 506 tacataaatacggtactaagtgttttcaaaataaaagtaatttatcgtaacgaagtatcg 447
Query: 235 ttttcaagcctacatcagtatctgtaaattactttttaaatca-ttaaaacgggcgtccc 293
|||| |||||||||||| ||||||||||||||||||||||||| |||| | ||||| ||
Sbjct: 446 tttttaagcctacatcactatctgtaaattactttttaaatcatttaagtcaggcgtacc 387
Query: 294 atttgaaagttatcataatataagt---ttcataattctcaaaattaaataggctatttt 350
||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct: 386 atttgcaagttatcataatataagtctaataataattctcaaaattaaaaaggctatttt 327
Query: 351 atatttttt 359
|||||||||
Sbjct: 326 atatttttt 318
>BF01030A2C06
Length = 599
Score = 145 bits (73), Expect = 3e-34
Identities = 118/131 (90%), Gaps = 4/131 (3%)
Strand = Plus / Minus
Query: 232 tcgttttcaagcctacatcagtatctgtaaattactttttaaatca-ttaaaacgggcgt 290
||||||| |||||||||||| ||||||||||||||||||||||||| ||||| | |||||
Sbjct: 131 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaaatcaggcgt 72
Query: 291 cccatttgaaagttatcataatataagtt---tcataattctcaaaattaaataggctat 347
||||||| |||||||||||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 71 accatttgcaagttatcataatataagtttaataataatcctcaaaattaaaaaggctat 12
Query: 348 tttatattttt 358
|||||||||||
Sbjct: 11 tttatattttt 1
Score = 143 bits (72), Expect = 1e-33
Identities = 138/160 (86%)
Strand = Plus / Minus
Query: 5 cttttaacgaaaacactgccttaagtctttgagatataaaaaaaaaatatatggtggaat 64
||||||| |||||| |||||||||||||||||| ||||| |||| ||||||||| |||||
Sbjct: 363 cttttaaagaaaacgctgccttaagtctttgaggtataacaaaataatatatggcggaat 304
Query: 65 tgtgtatcttatataggtctatagaaaagtctgcgttggcatatgtctataccttaaaga 124
| |||||||||||||| |||| |||||||| || ||||||||||||||||||||| ||
Sbjct: 303 tttgtatcttatatagatctacagaaaagttcccgatggcatatgtctataccttaagga 244
Query: 125 aaacatactataaccattttacaacttctaaaaattggca 164
|||||||||| |||||| || || ||||||||||||
Sbjct: 243 ttacatactatatacattttctaagttttaaaaattggca 204
>BF01059A2E06
Length = 702
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 1771 tgttagccctgcgccttccacagcgtcaccggaagagtgggcgagtgctgggaccggccc 1830
||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 662 tgttagccctgcggcttttacagcgtcaccggaagagtgggccggtgctgggaccggccc 603
Query: 1831 gtta 1834
||||
Sbjct: 602 gtta 599
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,792
Number of extensions: 9123
Number of successful extensions: 9123
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 9113
Number of HSP's successfully gapped: 9
Length of query: 1882
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1865
Effective length of database: 8,119,229
Effective search space: 15142362085
Effective search space used: 15142362085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)