BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11660 (UTR included)
(2326 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_306_C1 188 3e-47
>BF14_306_C1
Length = 1041
Score = 188 bits (95), Expect = 3e-47
Identities = 170/195 (87%)
Strand = Plus / Plus
Query: 1572 atagaagttaaggctgtagtctcaccgatagtaacagcattatcgtggttgttgtctttc 1631
|||||||||||||||| || ||||||||||| ||||| || | ||| | ||||| |||
Sbjct: 563 atagaagttaaggctgcagcctcaccgatagctacagcgttttgctggctattgtccttc 622
Query: 1632 ctggttaccaaattcttcccgtccctggaccgtcacgttggcttcctcgtgttcggtggg 1691
||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 623 ctgattaccaaattcttcccgtccctggaccgtcacgtcggcttcctcatgttcggtggg 682
Query: 1692 tgttgtgtcgtatctttagtcttctcactgctagtcattccagagaccaaaggaaagagc 1751
|||||||||| | || | |||||| ||||| || |||||||||||||||||||||||
Sbjct: 683 tgttgtgtcgcggcgttcgccttctcgctgctggttgttccagagaccaaaggaaagagc 742
Query: 1752 ttctctgagatacaa 1766
|||||||| ||||||
Sbjct: 743 ttctctgaaatacaa 757
Score = 131 bits (66), Expect = 5e-30
Identities = 255/318 (80%)
Strand = Plus / Plus
Query: 1020 aaaggcgatcgtgaggcggcggcgtcgtccttgtgcacaattcgcgggcgttcccgggct 1079
||||||||||| |||||||| ||||||| | |||| || ||||| |||||||| |||
Sbjct: 11 aaaggcgatcgcgaggcggctgcgtcgtgtctcagcaccatccgcggccgttcccgagct 70
Query: 1080 gctgttgaagctgaactgagtctcattgaggccgatgttaaagcctctatggaaaaaacg 1139
| ||| ||||| || || |||||||| ||| | || ||||| || || |||||||||||
Sbjct: 71 ggtgtcgaagccgagctcagtctcatcgagactgacgttaaggcttcaatggaaaaaaca 130
Query: 1140 gcgtcgttcaaggatatatcccgaggcagtaacttcaaggcgttctacatctcgtgtgcg 1199
||| || | | ||| | | || |||||||||||||||||||||||| || || || ||
Sbjct: 131 gcgacggtaatggacgtgttccaaggcagtaacttcaaggcgttctatatatcctgcgct 190
Query: 1200 cttcaattcttccaacagttctgtggtatcaacgctgttctgttctatatgacggatatc 1259
| ||||||||||||||| |||| |||||||||||||||||||| |||||||| |||
Sbjct: 191 ttggtgttcttccaacagttcagtggcatcaacgctgttctgttctacatgacggacatc 250
Query: 1260 ttcgcttcctctggaagtgaccttgaacctgccatctcaaccatcatcgttggagccgtc 1319
|||| |||||||| || ||||| | ||||||||| ||||||| || | ||||||||
Sbjct: 251 ttcgagtcctctggcagcgacctccagcctgccatcgcaaccattataatcggagccgtt 310
Query: 1320 caggtagcggcgtcttgt 1337
||||| | |||||||||
Sbjct: 311 caggtggtagcgtcttgt 328
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,981
Number of extensions: 5996
Number of successful extensions: 5996
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5994
Number of HSP's successfully gapped: 2
Length of query: 2326
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2309
Effective length of database: 8,119,229
Effective search space: 18747299761
Effective search space used: 18747299761
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)