BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11674 (UTR included)
(2218 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 149 2e-35
BF14_729_C1 115 3e-25
>BF14_729_C3
Length = 2041
Score = 149 bits (75), Expect = 2e-35
Identities = 188/224 (83%), Gaps = 5/224 (2%)
Strand = Plus / Minus
Query: 53 tttttgatgtctgagatatgtttcttaacccttttaccgatgcaattttt-gtctgtcca 111
||||||||||||||||| |||| |||||| ||| ||||||||| | || |||||||||
Sbjct: 1234 tttttgatgtctgagatgtgttccttaactcttgtaccgatgctcctcttcgtctgtcca 1175
Query: 112 atgtatgacaaaccacagtcacaatcgagtttgtatacctccctccgcttttggtaaagg 171
||||||||||| ||||||||||| |||||||||||||| || |||| | |||||||
Sbjct: 1174 atgtatgacaagccacagtcacagtcgagtttgtatacaccc----gcttgttgtaaagg 1119
Query: 172 tattacactcttgataggtctcaagaattggcttacttttttgtgtcgtttgtatatagt 231
|| ||| ||||| ||||||||||||||||| ||||| || ||| ||||||| |||||
Sbjct: 1118 aatgttacttttgattggtctcaagaattggctcactttcttatgtggtttgtaaatagt 1059
Query: 232 cttgatcgaaaccttgtttaaaatgttgcctattctgtcagtaa 275
|| || |||||||| || || ||||||||||||||||||||||
Sbjct: 1058 tttaatggaaaccttcttcaagatgttgcctattctgtcagtaa 1015
Score = 119 bits (60), Expect = 2e-26
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 323 gagctgcagcatatagaacatgctatcactaccaacaaactgcccgtgcttcgccagcat 382
|||||||||||| || |||||||| |||||| |||||| |||||||||| ||||||||||
Sbjct: 888 gagctgcagcatgtaaaacatgctctcactatcaacaacctgcccgtgcctcgccagcat 947
Query: 383 cgcaagaaccacttgaagccacccatagttga 414
|||||||||||| |||||||||||| ||||||
Sbjct: 948 cgcaagaaccacctgaagccacccacagttga 979
>BF14_729_C1
Length = 981
Score = 115 bits (58), Expect = 3e-25
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 178 actcttgataggtctcaagaattggcttacttttttgtgtcgtttgtatatagtcttgat 237
||||||||||||||||||||||||||| ||||| || ||| |||||| |||||||||||
Sbjct: 39 actcttgataggtctcaagaattggctcactttcttatgtggtttgtgaatagtcttgat 98
Query: 238 cgaaaccttgtttaaaatgttgcctattctgtcagtaa 275
|||| ||| || |||||||||||||||||||||||||
Sbjct: 99 ggaaagcttcttcaaaatgttgcctattctgtcagtaa 136
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,052
Number of extensions: 5339
Number of successful extensions: 5339
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5339
Number of HSP's successfully gapped: 4
Length of query: 2218
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2201
Effective length of database: 8,119,229
Effective search space: 17870423029
Effective search space used: 17870423029
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)