BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11688 (UTR included)
(1225 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 155 2e-37
BF01019A1H08 137 5e-32
BF14_335_C4 107 4e-23
BF14_335_C2 101 3e-21
BF01049B1F01 94 6e-19
BF01016B1E06 84 6e-16
BF01014B2F02 80 9e-15
BF01060B1D11 78 4e-14
BF01044B1A07 76 1e-13
BF01016A2B02 76 1e-13
BF01056B2D01 70 9e-12
BF01045B1A06 70 9e-12
>BF01047B2H03
Length = 758
Score = 155 bits (78), Expect = 2e-37
Identities = 253/310 (81%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 68 tgctatatctgtgggaaggcagttggaactgctaagcatttgttgatggtatgtaaggta 127
||||||||||| | | |||||||||||| |||| |||||||| |||||| ||||| | ||
Sbjct: 361 tgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtaggcta 302
Query: 128 cacctggatagcggtcaatactcgcgacgtc-acgatagggttctggaaatcatacctaa 186
| |||||||||||||||||||| || || | ||||||||| | | |||||| | |
Sbjct: 301 ctcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatacatga 242
Query: 187 tgcggttagtttttcggtagctagagcgcaaaggcaaataaccacaaatgagcgattagg 246
||||||||| ||| ||||| | ||| ||| ||||||||||||| | |||||||
Sbjct: 241 agcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgattaat 182
Query: 247 aggttttgtgagagagggcactagggctataaaatcaaataccaagccttactccatcct 306
|||||||||||||| | || |||||||||||| ||||| | |||||||||||| |||||
Sbjct: 181 tggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatcct 122
Query: 307 taaagcggcttcggattggactataatgatggatacgtaggaaaaacaatacaaaatccc 366
|||||||| ||||||||| |||||||| ||||||||||| | ||| ||||||||||||
Sbjct: 121 taaagcggtttcggattgcactataatcatggatacgtatggggaacgatacaaaatccc 62
Query: 367 tgaggatatt 376
||| |||||
Sbjct: 61 cgagcatatt 52
>BF01019A1H08
Length = 504
Score = 137 bits (69), Expect = 5e-32
Identities = 90/97 (92%)
Strand = Plus / Minus
Query: 507 ttagataggctccccttaaacttacacctgggtcgcaagtctcaggcactgttgaggctc 566
||||||||| |||||||||| |||||||||||||||| || ||||||||||||| ||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 567 ctctccctgcaacgcgatggacccagcacccgcacgg 603
|||||||||||||||||||||||| ||||||||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacccgcacgg 396
>BF14_335_C4
Length = 1491
Score = 107 bits (54), Expect = 4e-23
Identities = 79/86 (91%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 518 ccccttaaacttacacctgggtcgcaagtctcaggcactgttgaggctcctctccctgca 577
|||||||||| ||||||||||||||||||| ||||||||||||| |||||||| ||||||
Sbjct: 1248 ccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgca 1306
Query: 578 acgcgatggacccagcacccgcacgg 603
||||||||| ||| ||| ||||||||
Sbjct: 1307 acgcgatggtccccgcaaccgcacgg 1332
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 3e-21
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 521 cttaaacttacacctgggtcgcaagtctcaggcactgttgaggctcctctccctgcaacg 580
||||||| |||||||| ||||||| || ||||||||||||| ||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 581 cgatggacccagcacccgcacgg 603
|| |||||| ||||||||||||
Sbjct: 862 cggcggacccggcacccgcacgg 840
>BF01049B1F01
Length = 840
Score = 93.7 bits (47), Expect = 6e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 518 ccccttaaacttacacctgggtcgcaagtctcaggcactgttgaggctcctctccctgca 577
||||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 649 ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 578 acg 580
|||
Sbjct: 589 acg 587
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 6e-16
Identities = 118/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 436 ttttaaaatttggttaggtagagagaagagcttggacggtgaaagtgagcgtttaaatcg 495
|||| ||||||||||||||||||||| ||| |||||||||| | ||||||||||||
Sbjct: 324 ttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaac--- 268
Query: 496 tttaaatggcgttagataggctccccttaaacttacacctgggtcgcaagtctcaggcac 555
|||||||||||| |||||||||| |||||||||||||| | || | |||||
Sbjct: 267 --------gcgttagataggg-ccccttaaacctacacctgggtcgctactccccggcac 217
Query: 556 tgttgaggctcctctccctgcaac 579
|||||| ||||||||| |||||||
Sbjct: 216 tgttgaagctcctctctctgcaac 193
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 9e-15
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 529 tacacctgggtcgcaagtctcaggcactgttgaggctcctctccctgcaacgcgatggac 588
||||||||||||||||||| |||| ||| ||| ||||||||||||||||||| |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 589 ccagcacccgcacgg 603
|| ||||||||||||
Sbjct: 565 ccggcacccgcacgg 551
>BF01060B1D11
Length = 799
Score = 77.8 bits (39), Expect = 4e-14
Identities = 91/108 (84%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 19 cccagatcaaagtaatttaataagatgggc----taaaggtaccgaaaacacctgctata 74
||||||||| ||||||||| ||||| ||| ||||| ||||||||| || |||||||
Sbjct: 233 cccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctata 174
Query: 75 tctgtgggaaggcagttggaactgctaagcatttgttgatggtatgta 122
| || | |||||||||||||| ||||||||||||| |||||| |||||
Sbjct: 173 tttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
>BF01044B1A07
Length = 806
Score = 75.8 bits (38), Expect = 1e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 530 acacctgggtcgcaagtctcaggcactgttgaggctcctctccctgcaacgcgatggacc 589
|||||||| |||| |||| ||| ||| ||||| |||||||||||||| ||||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 590 cagcacccgcacgg 603
| |||||||||||
Sbjct: 472 cgccacccgcacgg 459
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 1e-13
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 506 gttagataggctccccttaaacttacacctgggtcgcaagtctcaggcactgttgaggct 565
|||||||||| || ||||| | |||||||| ||||||| || ||||||||||||| |||
Sbjct: 298 gttagataggggcctcttaagcctacacctgagtcgcaattcccaggcactgttgaagct 239
Query: 566 cctctccctgcaacgcgatggacccagcac 595
||||||||| ||||||| |||||| ||||
Sbjct: 238 cctctcccttcaacgcgcgggacccggcac 209
>BF01056B2D01
Length = 728
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 549 caggcactgttgaggctcctctccctgcaacgcgatggacccagcacccgcacgg 603
||||| ||||||| |||||||||||||||| | ||||||||| ||||||||||||
Sbjct: 162 caggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacgg 108
>BF01045B1A06
Length = 820
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 550 aggcactgttgaggctcctctccctgcaacgcgatggacccagcacccgca 600
|||||||||||| ||||||||||||||||| | |||||||| |||||||||
Sbjct: 740 aggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgca 690
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 125,794
Number of extensions: 2136
Number of successful extensions: 2136
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2133
Number of HSP's successfully gapped: 14
Length of query: 1225
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1208
Effective length of database: 8,119,229
Effective search space: 9808028632
Effective search space used: 9808028632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)