BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11689 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 125 2e-28
BF14_335_C4 115 2e-25
BF14_335_C2 107 5e-23
BF01056B2D01 94 7e-19
BF01044B1A07 88 5e-17
BF01014B2F02 80 1e-14
BF01044A1D01 70 1e-11
>BF01019A1H08
Length = 504
Score = 125 bits (63), Expect = 2e-28
Identities = 107/121 (88%), Gaps = 8/121 (6%)
Strand = Plus / Minus
Query: 853 gccccttaaacctacacctgggtcgttactaccaagtcccag-cactgttgaagctcctg 911
||||||||||||||||||||||||| ||| |||||| ||||||||||||||||
Sbjct: 482 gccccttaaacctacacctgggtcg-------caactcccaggcactgttgaagctcctc 430
Query: 912 tccctgcaacgcgatggtcccggcacccgcacggtgaaaccatagaatgctgagaggttt 971
||||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 429 tccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggttt 370
Query: 972 c 972
|
Sbjct: 369 c 369
>BF14_335_C4
Length = 1491
Score = 115 bits (58), Expect = 2e-25
Identities = 109/124 (87%), Gaps = 9/124 (7%)
Strand = Plus / Plus
Query: 853 gccccttaaacctacacctgggtcgttactaccaagtcccag-cactgttgaagctcctg 911
||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 1247 gccccttaaacctacacctgggtcg-------caagtcccaggcactgttgaagctcctc 1299
Query: 912 tccctgcaacgcgatggtcccggcacccgcacggtgaaaccatagaatgctgagaggttt 971
||| ||||||||||||||||| ||| |||||||||||| |||| |||||||||||| |||
Sbjct: 1300 tcc-tgcaacgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagtttt 1358
Query: 972 cgtc 975
||||
Sbjct: 1359 cgtc 1362
>BF14_335_C2
Length = 1827
Score = 107 bits (54), Expect = 5e-23
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 894 gcactgttgaagctcctgtccctgcaacgcgatggtcccggcacccgcacggtgaaacca 953
||||||||||||||||| ||||||||||||| || |||||||||||||||||||| |||
Sbjct: 891 gcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggtgaatcca 832
Query: 954 tagaatgctgagaggtttcgtc 975
||||| ||| ||||||||||||
Sbjct: 831 tagaaagctaagaggtttcgtc 810
>BF01056B2D01
Length = 728
Score = 93.7 bits (47), Expect = 7e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 897 ctgttgaagctcctgtccctgcaacgcgatggtcccggcacccgcacggtgaaaccatag 956
|||||||||||||| ||||||||| | ||||| |||||||||||||||||||| ||| |
Sbjct: 156 ctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatgg 97
Query: 957 aatgctgagaggtttcgtc 975
|||| ||||||||||||||
Sbjct: 96 aatgttgagaggtttcgtc 78
>BF01044B1A07
Length = 806
Score = 87.7 bits (44), Expect = 5e-17
Identities = 78/88 (88%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 887 agtcccag-cactgttgaagctcctgtccctgcaacgcgatggtcccggcacccgcacgg 945
|||||||| ||| |||||||||||| ||||||| ||||||||| |||| |||||||||||
Sbjct: 518 agtcccagacacagttgaagctcctctccctgccacgcgatggacccgccacccgcacgg 459
Query: 946 tgaaaccatagaatgctgagaggtttcg 973
|||| |||| ||| ||||||| ||||||
Sbjct: 458 tgaatccattgaacgctgagaagtttcg 431
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/75 (89%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 901 tgaagctcctgtccctgcaacgcgatggtcccggcacccgcacggtgaaaccatagaatg 960
|||||||||| |||||||||||| ||| |||||||||||||||||| | ||| |||||
Sbjct: 593 tgaagctcctctccctgcaacgc--tggacccggcacccgcacggtgcatccactgaatg 536
Query: 961 ctgagaggtttcgtc 975
|||||||||||||||
Sbjct: 535 ctgagaggtttcgtc 521
>BF01044A1D01
Length = 742
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 933 ggcacccgcacggtgaaaccatagaatgctgagaggtttcgtc 975
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 738 ggcacccgcacggtgaagccattgaatgctgagaggtttcgtc 696
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,490
Number of extensions: 4617
Number of successful extensions: 4617
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 4615
Number of HSP's successfully gapped: 7
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)