BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11725 (UTR included)
(2611 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1F07 1281 0.0
BF01040B2F01 123 2e-27
>BF01051B1F07
Length = 662
Score = 1281 bits (646), Expect = 0.0
Identities = 658/662 (99%)
Strand = Plus / Plus
Query: 521 agccgatatgaccattcaaaagaattctaagattttagtaaatgttgaagaagcattaga 580
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 agccgatatgaccattcaaaagaattctaacattttagtaaatgttgaagaagcattaga 60
Query: 581 agatttaattgtagtatcctatacagacgtaaacaaaaagtttcaaggtgtactactaga 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatttaattgtagtatcctatacagacgtaaacaaaaagtttcaaggtgtactactaga 120
Query: 641 ttctaataaaggaaatttacctttcggagtatatagtctccatccatcgtttaccaagca 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctaataaaggaaatttacctttcggagtatatagtctccatccatcgtttaccaagca 180
Query: 701 agttgaacaggcagacagtaaagatgaaaagttacattccgttagtcaaaggtttactta 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agttgaacaggcagacagtaaagatgaaaagttacattccgttagtcaaaggtttactta 240
Query: 761 tcaagatcctgaatatgaagacgtccaaaagtcaaaaaagcagggttcaaaatccaaatc 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaagatcctgaatatgaagacgtccaaaagtcaaaaaagcagggttcaaaatccaaatc 300
Query: 821 ccaggcgcgacaaaagatgacggtgagattacgccctaggaaggtgttgtgttctaattg 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaggcgcgacaaaagatgacggtgagattacgccctaggaaggtgttgtgttctaattg 360
Query: 881 ccaaggtatttgtaatgagaatagtgaaaacgttgacgtgtccaagaagcgaaaacatga 940
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaaggtatttgtaacgagaatagtgaaaacgttgacgtgtccaagaagcgaaaacatga 420
Query: 941 cttggatgacgactcacagagggatagttctgagtcatcgaagttagagaagaagtacct 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttggatgacgactcacagagggatagttctgagtcatcgaagttagagaagaagtacct 480
Query: 1001 catgggtggcatgttgatgcctaaactatctaaattacagcctaatgatattacgactgc 1060
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 catgggtggcatgttgatgcctaaactatctaaattacagcctaatgatataacgactgc 540
Query: 1061 tactaaagcgaaaaatacgtccaaatctagtgacaaaggtagaagcttaaagagatctca 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tactaaagcgaaaaatacgtccaaatctagtgacaaaggtagaagcttaaagagatctca 600
Query: 1121 caatgacgatggaccaacgagggagcttgcgtttgttagtgtttcggacaatagtgataa 1180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caatgatgatggaccaacgagggagcttgcgtttgttagtgtttcggacaatagtgataa 660
Query: 1181 ag 1182
||
Sbjct: 661 ag 662
>BF01040B2F01
Length = 721
Score = 123 bits (62), Expect = 2e-27
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 1 tttgattttaactgacaatagtagtttttatatgcaaaaattatcttactactgtgataa 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 71 tttgattttaactgacaatagtagtttttatatgcaaaannnatcttactactgtgataa 12
Query: 61 tggatatttac 71
|||||||||||
Sbjct: 11 tggatatttac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 369,173
Number of extensions: 8850
Number of successful extensions: 8850
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8850
Number of HSP's successfully gapped: 2
Length of query: 2611
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2594
Effective length of database: 8,119,229
Effective search space: 21061280026
Effective search space used: 21061280026
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)