BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11726 (UTR included)
(2548 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2668_C1 1013 0.0
>BF14_2668_C1
Length = 732
Score = 1013 bits (511), Expect = 0.0
Identities = 511/511 (100%)
Strand = Plus / Plus
Query: 1137 ccgcttttgaagaactgccgcaaaatcggtgaaggtgtttatggggaagtgtttctgtgg 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccgcttttgaagaactgccgcaaaatcggtgaaggtgtttatggggaagtgtttctgtgg 61
Query: 1197 cgagctcgtgacggaagggctcgtgtcttaaaggttataccaatcgctggggacatcaaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 cgagctcgtgacggaagggctcgtgtcttaaaggttataccaatcgctggggacatcaaa 121
Query: 1257 gtcaatggggaagaacagaagggcttccatgaaattctctcggagattgtgattgctatg 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcaatggggaagaacagaagggcttccatgaaattctctcggagattgtgattgctatg 181
Query: 1317 gaattgagcgcactacgcgctccaatagcagacataacgaatcatttaaatgagggcaag 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaattgagcgcactacgcgctccaatagcagacataacgaatcatttaaatgagggcaag 241
Query: 1377 agcttggaaacattggatttacatactgtagaaaatgctacggatgtttttaatgaggtg 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agcttggaaacattggatttacatactgtagaaaatgctacggatgtttttaatgaggtg 301
Query: 1437 ttatcagtacgctgcgtgactgggggctatccgtccagacttctggacctctgggacctg 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttatcagtacgctgcgtgactgggggctatccgtccagacttctggacctctgggacctg 361
Query: 1497 tatgacgagagcaagggctcggagaacgacaacccagctgttctgccgcccgaccagcag 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatgacgagagcaagggctcggagaacgacaacccagctgttctgccgcccgaccagcag 421
Query: 1557 ttcattgtgctggaactggccaacgctggacaggatttggaaagctatcagtttgtgaac 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttcattgtgctggaactggccaacgctggacaggatttggaaagctatcagtttgtgaac 481
Query: 1617 gccgaacagtcgtatgcactgttcaaacaga 1647
|||||||||||||||||||||||||||||||
Sbjct: 482 gccgaacagtcgtatgcactgttcaaacaga 512
Score = 244 bits (123), Expect = 6e-64
Identities = 126/127 (99%)
Strand = Plus / Plus
Query: 1645 agagttcgtgtttcgtggttcgcggtcgcgccttcaacctgccgagctgtggagtgaagg 1704
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agagtacgtgtttcgtggttcgcggtcgcgccttcaacctgccgagctgtggagtgaagg 665
Query: 1705 cttccatcatcgactactcgttgtcccgggcctcggtgagccgtggagttctgtactctg 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 cttccatcatcgactactcgttgtcccgggcctcggtgagccgtggagttctgtactctg 725
Query: 1765 atctggc 1771
|||||||
Sbjct: 726 atctggc 732
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 369,822
Number of extensions: 10397
Number of successful extensions: 10397
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10397
Number of HSP's successfully gapped: 2
Length of query: 2548
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2531
Effective length of database: 8,119,229
Effective search space: 20549768599
Effective search space used: 20549768599
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)