BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11748 (UTR included)
(1555 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_463_C1 1600 0.0
>BF14_463_C1
Length = 903
Score = 1600 bits (807), Expect = 0.0
Identities = 816/819 (99%)
Strand = Plus / Plus
Query: 533 agctaaaatagaactcggcgatgtgacaccgcataatattaagcaattaaagaagttgaa 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 agctaaaatagaactcggcgatgtgacaccgcataatattaagcaattaaagaagttgaa 144
Query: 593 tacagttgtattcccagtgtcctacaacgacaaattttataaagatgttttggaagctgg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tacagttgtattcccagtgtcctacaacgacaaattttataaagatgttttggaagctgg 204
Query: 653 tgaattagctaagctggcctattataacgatattgtggttggggctgtttgttgtagaat 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgaattagctaagctggcctattataacgatattgtggttggggctgtttgttgtagaat 264
Query: 713 agatacatcagataactctagaagattgtatataatgaccttaggttgtctatatcccta 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatacatcagataactctagaagattgtatataatgaccttaggttgtctatatcccta 324
Query: 773 cagaagacttggtataggcactctgatggtggaacatgtgctcaagtatgttgaacagga 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagaagacttggtataggcactctgatggtggaacatgtgctcaagtatgttgaacagga 384
Query: 833 tggcaattttgatagtattttcttacatgttcaggtcaataatgagggtgcgatagactt 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggcaattttgatagtattttcttacatgttcaggtcaataatgagggtgcgatagactt 444
Query: 893 ttataagaagtttggttttgaaattgttgaaacaaaagaacattactataagcggataga 952
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 445 ttataagaagtttggttttgaaattgtcgaaacaaaagaacattactataagcggataga 504
Query: 953 gccagcagatgctcacgtcttacagaaaaccataagacaaccacagtatacaacgctgta 1012
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gccggcagatgctcacgtcttacagaaaaccataagacaaccacagtatacaacgctgta 564
Query: 1013 taatgggagcgtgccccatgcgaaaacaaacggtcatgactgaacaaatcttcccgtcgt 1072
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taacgggagcgtgccccatgcgaaaacaaacggtcatgactgaacaaatcttcccgtcgt 624
Query: 1073 ctcaaatcaactgtgaaaggcaagtgatataaaataagaatcataataaggtcactttta 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctcaaatcaactgtgaaaggcaagtgatataaaataagaatcataataaggtcactttta 684
Query: 1133 tatttacataattgaagattgtaatagaaacgataatttgtatgcggttgtacaatgttc 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatttacataattgaagattgtaatagaaacgataatttgtatgcggttgtacaatgttc 744
Query: 1193 ttatcatatttgactgatacaattcttgtaacgatttcattgggatgtaatgtagtccgc 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttatcatatttgactgatacaattcttgtaacgatttcattgggatgtaatgtagtccgc 804
Query: 1253 atgttgaccaaaaaactaatacatttgcatttttcaatatgcgcctacaatgtatacatt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atgttgaccaaaaaactaatacatttgcatttttcaatatgcgcctacaatgtatacatt 864
Query: 1313 tacatgaaattgtactatctataaatttttctatctagc 1351
|||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tacatgaaattgtactatctataaatttttctatctagc 903
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,115
Number of extensions: 4399
Number of successful extensions: 4399
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4399
Number of HSP's successfully gapped: 1
Length of query: 1555
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1538
Effective length of database: 8,119,229
Effective search space: 12487374202
Effective search space used: 12487374202
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)