BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11749 (UTR included)
(2278 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2D11 1396 0.0
>BF01022A2D11
Length = 744
Score = 1396 bits (704), Expect = 0.0
Identities = 725/732 (99%)
Strand = Plus / Plus
Query: 985 atgcagtggatgaaatggagccagcactcacggtcacatttaatagtgagggagatagaa 1044
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 13 atgcagtggatgaaatggagccagcactcacggtcacatttaatactgagggagatagaa 72
Query: 1045 ttgtagctggatataagaaatatttgagaacttttgacgtcgaaagaccaggaagagatt 1104
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 73 ttgttgctggatataagaaatatttgagaacttttgatgtcgaaagaccaggaagagatt 132
Query: 1105 ttgctgagcataagatcaattcaccggcttcttgttttgctacacatgataatctattag 1164
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttgcagagcacaagatcaattcaccggcttcttgttttgctacacatgataatctattag 192
Query: 1165 ctatgggctcatggaatacaactataactttatacaataccagtgaatttggaacatata 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctatgggctcatggaatacaactataactttatacaataccagtgaatttggaacatata 252
Query: 1225 agagtattgggaaaatgcatggccactcagggggcgtcactcacttgaagtttactcaag 1284
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 253 agagtattgggaaaatgcatggccactcagggggtgtcactcacttgaagtttactcaag 312
Query: 1285 atggtcaaaaattagtgtcgggagcgagaaaggatcacaggctactcatttgggatattc 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atggtcaaaaattagtgtcgggagcgagaaaggatcacaggctactcatttgggatattc 372
Query: 1345 gttattatcaaaggccgctgaatgtattaagtagagtcgttgacacaaaccaaaggatat 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gttattatcaaaggccgctgaatgtattaagtagagtcgttgacacaaaccaaaggatat 432
Query: 1405 attttgatatatcaccatgcggtaaatatttggttaccggaggtacggatggtgtgataa 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 attttgatatatcaccatgcggtaaatatttggttaccggaggtacggatggtgtgataa 492
Query: 1465 aagtatgggatgcggataacattgattggattaatagattagatgctaccgatgacaaag 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aagtatgggatgcggataacattgattggattaatagattagatgctaccgatgacaaag 552
Query: 1525 ataatgctacatacaggtttccattgcataaagactgctgcaatagcctgtcaatacatc 1584
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 553 ataatgctacatacaggtttccgttgcataaagactgctgcaatagcctgtcaatacatc 612
Query: 1585 cgttaagaccaatattagctaccggctccggtcaatatcatttcgaggatcctgcccagg 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgttaagaccaatattagctaccggctccggtcaatatcatttcgaggatcctgcccagg 672
Query: 1645 atttggaagagaatttcggagtacaggaagacattactgagactgataaagggttaagaa 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atttggaagagaatttcggagtacaggaagacattactgagactgataaagggttaagaa 732
Query: 1705 atgataaatact 1716
||||||||||||
Sbjct: 733 atgataaatact 744
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 346,541
Number of extensions: 8960
Number of successful extensions: 8960
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8960
Number of HSP's successfully gapped: 1
Length of query: 2278
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2261
Effective length of database: 8,119,229
Effective search space: 18357576769
Effective search space used: 18357576769
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)