BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11767 (UTR included)
(2482 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 127 9e-29
BF01043B1E03 98 8e-20
BF01031B2E06 96 3e-19
BF01019A1H08 84 1e-15
BF01037A2H12 70 2e-11
BF14_335_C4 70 2e-11
BF01017A1F03 68 7e-11
>BF14_335_C2
Length = 1827
Score = 127 bits (64), Expect = 9e-29
Identities = 132/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 2105 cgctcacctccactatccaagctcctctccctacctaacaaaatttgaaaagaacctact 2164
||||||||||||| |||||||||||||| | ||||| |||||||||| |||||||||
Sbjct: 949 cgctcacctccaccgtccaagctcctctctc---ctaaccaaatttgaaacgaacctact 1005
Query: 2165 agggctgccttcgaagttcgttccaagaatgaattgatgtgagttctggacagttccaag 2224
|| |||| ||||||||| ||||| ||||||||| || ||| |||||||||||| |||||
Sbjct: 1006 agagctgtcttcgaagtacgttcgaagaatgaactggtgttagttctggacaggcccaag 1065
Query: 2225 tcttttagcaggttgtcgagagatttagccgtta 2258
| |||||| ||| ||| |||||||||||| ||||
Sbjct: 1066 tattttagtaggctgtagagagatttagctgtta 1099
>BF01043B1E03
Length = 830
Score = 97.6 bits (49), Expect = 8e-20
Identities = 120/143 (83%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 2106 gctcacctccactatccaagctcctctccctacctaacaaaatttgaaaagaacctacta 2165
||||||||||||| |||||| ||||||| ||||||||| |||||||||| ||| |||
Sbjct: 368 gctcacctccactgtccaaggtcctctctctacctaaccaaatttgaaacaaac---cta 312
Query: 2166 gggctgccttcgaagttcgttccaagaatgaattgatgtgagttctggacagttccaagt 2225
|| ||||||| | ||| |||||||||||||| ||||||| |||||||| ||| |||||
Sbjct: 311 ggcctgcctttgcagtacgttccaagaatgatttgatgttagttctgggcaggctcaagt 252
Query: 2226 cttttagcaggttgtcgagagat 2248
||| || ||||||| |||||||
Sbjct: 251 gtttcagtaggttgtagagagat 229
>BF01031B2E06
Length = 707
Score = 95.6 bits (48), Expect = 3e-19
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 2168 gctgccttcgaagttcgttccaagaatgaattgatgtgagttctggacagttccaagtct 2227
|||||||||||||| |||| || || | ||||||| || ||||||||| ||||| |
Sbjct: 636 gctgccttcgaagtatgttctaaagattatttgatgttagatctggacaggcccaaggtt 577
Query: 2228 tttagcaggttgtcgagagatttagccgttacaccgctcgctcccacttctaccgcgtat 2287
||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 576 tttagtaggttgtggagagatttagcttttacaacgctcgctcccacttctaccgcgtac 517
Query: 2288 aaat 2291
||||
Sbjct: 516 aaat 513
>BF01019A1H08
Length = 504
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2003 gagacgaaacctcttagcattcaatgtattctccgtgcgaatgccgggtccatcgcgttg 2062
|||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 2063 ca 2064
||
Sbjct: 424 ca 425
>BF01037A2H12
Length = 773
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2221 caagtcttttagcaggttgtcgagagatttagccgttacaccgctcgctcccacttctac 2280
|||||||||||||||||||||||||||||| || ||| ||| |||||||| |||| |||
Sbjct: 742 caagtcttttagcaggttgtcgagagatttggcttttatacctctcgctcctacttttac 683
Query: 2281 cgcgtataaat 2291
| |||| ||||
Sbjct: 682 ctcgtacaaat 672
>BF14_335_C4
Length = 1491
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2105 cgctcacctccactatccaagctcctctccctacctaacaaaatttgaaaagaacctact 2164
|||||||||| ||| |||||||||||||| ||||||||| |||| |||| || ||| ||
Sbjct: 1225 cgctcacctcaactttccaagctcctctctctacctaaccaaatatgaatcgatcctgct 1166
Query: 2165 agggctgcctt 2175
|||||||||||
Sbjct: 1165 agggctgcctt 1155
>BF01017A1F03
Length = 782
Score = 67.9 bits (34), Expect = 7e-11
Identities = 94/113 (83%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 2105 cgctcacctccactatccaagctcctctccctacctaacaaaatttgaaaagaacctact 2164
||||||||||||| | ||||||||||| ||| ||||| || || |||| || ||||
Sbjct: 240 cgctcacctccaccgtggaagctcctctctctatctaaccaacttagaaactaatgtact 181
Query: 2165 agggctgc--cttcgaagttcgttccaagaatgaattgatgtgagttctggac 2215
|||||||| ||| ||||| |||||||||||||||||||||| |||| |||||
Sbjct: 180 agggctgcgccttggaagtacgttccaagaatgaattgatgttagttttggac 128
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,172
Number of extensions: 5852
Number of successful extensions: 5852
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 5848
Number of HSP's successfully gapped: 7
Length of query: 2482
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2465
Effective length of database: 8,119,229
Effective search space: 20013899485
Effective search space used: 20013899485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)