BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11774 (UTR included)
(1408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1448_C1 648 0.0
BF14_335_C2 84 7e-16
BF01031B2E06 78 4e-14
BF01019A1H08 78 4e-14
>BF14_1448_C1
Length = 1323
Score = 648 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 415 tgtggtcactgaagttttattttattaaattatatcttttaacccccttattatgtgcta 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtggtcactgaagttttattttattaaattatatcttttaacccccttattatgtgcta 60
Query: 475 accgtgataattagaaaatattcaaaatgactgacgaagtaataaaacattctgtgcaca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accgtgataattagaaaatattcaaaatgactgacgaagtaataaaacattctgtgcaca 120
Query: 535 cgttggtgtttagatcacttaaacgatcacacgatatgtttctctcaaaccaaagtatgt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgttggtgtttagatcacttaaacgatcacacgatatgtttctctcaaaccaaagtatgt 180
Query: 595 tgccgccaatcgatgaaaaagcagaaaagatattacgaggaattaaagcgagggacagtt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgccgccaatcgatgaaaaagcagaaaagatattacgaggaattaaagcgagggacagtt 240
Query: 655 atgggcaagttatgacaacagtacaaaaggcacaagcattcaaacaactggagaccaaga 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggcaagttatgacaacagtacaaaaggcacaagcattcaaacaactggagaccaaga 300
Query: 715 gccagcctgagatccctcatgacacag 741
|||||||||||||||||||||||||||
Sbjct: 301 gccagcctgagatccctcatgacacag 327
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 780 accaacatccgcaaagaccatgccatcaaggtcaataagtattatgagctcact 833
|||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 1212 accaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcact 1159
>BF01031B2E06
Length = 707
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 777 gaaaccaacatccgcaaagaccatgccatcaaggtcaataagtatta 823
||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtatta 482
>BF01019A1H08
Length = 504
Score = 77.8 bits (39), Expect = 4e-14
Identities = 96/115 (83%)
Strand = Plus / Minus
Query: 1065 ataggggccccttaaatctacatctgggtctcaggtctcaagcactgtcgaagctcctct 1124
||||| |||||||||| ||||| ||||||| || || || ||||||| |||||||||||
Sbjct: 488 ataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctct 429
Query: 1125 ccctataatgcgatagactcggcccccacacggtgaatctatggaatgctgagag 1179
|||| || ||||| ||| |||| ||| ||||||||||| || ||||||| ||||
Sbjct: 428 ccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgctaagag 374
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 165,080
Number of extensions: 3336
Number of successful extensions: 3336
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 3336
Number of HSP's successfully gapped: 4
Length of query: 1408
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1391
Effective length of database: 8,119,229
Effective search space: 11293847539
Effective search space used: 11293847539
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)