BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11786 (UTR included)
(7174 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B2G11 1380 0.0
>BF01024B2G11
Length = 760
Score = 1380 bits (696), Expect = 0.0
Identities = 749/768 (97%), Gaps = 9/768 (1%)
Strand = Plus / Plus
Query: 6235 aacgaatcctttctcttcagaacgcgtccattatgagctgctccacttgctcagcggtga 6294
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 aacgaatcctttctcttcagaacgcgtccattatgatctgctccacttgctcagcggtga 60
Query: 6295 ttaacaagctgaaggttgtcgaggactccttgaggaactgtgataacaacaggagagaga 6354
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaacaagctgaaggttgtcgaggattccttgaggaactgtgataacaacaggagagaga 120
Query: 6355 tactgacggatctagcgagagtcgtacaggatctactcgaaagcgccataactgaaaagg 6414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactgacggatctagcgagagtcgtacaggatctactcgaaagcgccataactgaaaagg 180
Query: 6415 atacggaaatagcgcagttagagatgaaaggagttctgaatgaagaagacacaataactt 6474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atacggaaatagcgcagttagagatgaaaggagttctgaatgaagaagacacaataactt 240
Query: 6475 gcgaccgacttaagaatgacaaagagagattgcttcacagacttagagtggagaatgaaa 6534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcgaccgacttaagaatgacaaagagagattgcttcacagacttagagtggagaatgaaa 300
Query: 6535 gaattcttaatttcgacaaagcaccgaccgagcaaatttgtgaagagcgaggaagcgttc 6594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaattcttaatttcgacaaagcaccgaccgagcaaatttgtgaagagcgaggaagcgttc 360
Query: 6595 ccgtgttgacactcgctgatgatctcatggcgactggtgatgggatagcttgggtaacgg 6654
|||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 361 ccgtgttgacactcgccgatgatctcatggcggctggtggtgggatagcttgggtaacgg 420
Query: 6655 atgatgcggagcctgtgtgacctgtgtgacctgtgtggcgagatctcattaacagtatat 6714
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 atgatgcggagcctgtgtgacctgtgtga---------cgagatctcattaacagtatat 471
Query: 6715 atatgagtgggtttctgttctaacaaaggaaaagctaaagagaacagacatgttgagaac 6774
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 472 atatgagtgggtttctgttctaacaaaggaaaagccaaagagaacagacatgttgagaac 531
Query: 6775 tttcgagacttcaagaatgactgaattataggaatctgtgtggaattgactgcgatgata 6834
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 532 tttcaagacttcaagaatgactgaattataggaatatgtgtggaattgactgcgataata 591
Query: 6835 gacttgattgacttccctagcatccgggagtgacgtcagaaaagttacgcctgcattgtt 6894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gacttgattgacttccctagcatccgggagtgacgtcagaaaagttacgcctgcattgtt 651
Query: 6895 ttaaattagcatttattaatatattaactaaccttttattttacctatgcggctttatac 6954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 652 ttaaattagcatttattaatatattaactaaccttttattttacctatgcggctttaaac 711
Query: 6955 aatcggcttcaaactaaaataaataataacaacaatatatatatatat 7002
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aatcggcttcaaactaaaataaataataacaacaatatatatatatat 759
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 99,721
Number of extensions: 15265
Number of successful extensions: 15265
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15264
Number of HSP's successfully gapped: 2
Length of query: 7174
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 7156
Effective length of database: 8,109,745
Effective search space: 58033335220
Effective search space used: 58033335220
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)