BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11789 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2C08 1277 0.0
>BF01017A2C08
Length = 656
Score = 1277 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Plus
Query: 409 tatacttgttatatgcgataaaaaatctcgtgcctattgtaaaatatcatgattaatgtg 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatacttgttatatgcgataaaaaatctcgtgcctattgtaaaatatcatgattaatgtg 60
Query: 469 taataaatatagattaggtgtaaggtgttaaaatggacaagaaaaatgccattcggagag 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taataaatatagattaggtgtaaggtgttaaaatggacaagaaaaatgccattcggagag 120
Query: 529 gcaaaaggccatccaaagtgctcgaagaaaattattgggattgtagcgtttgtacataca 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaaaggccatccaaagtgctcgaagaaaattattgggattgtagcgtttgtacataca 180
Query: 589 gaaataacgctgaggccttcaagtgttcgatgtgtgacgttagaaaaggtacatctaccc 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaataacgctgaggccttcaagtgttcgatgtgtgacgttagaaaaggtacatctaccc 240
Query: 649 gcaagccccgtctgaacccggcgttggtggcggcccaggccgctggcacagccaccagct 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaagccccgtctgaacccggcgttggtggcggcccaggccgctggcacagccaccagct 300
Query: 709 cgcagaagagaccaaggtcagcatcgctcaagaagaagcggaggccgccccgcctgaaca 768
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgcagaagagaccaaggtcagcctcgctcaagaagaagcggaggccgccccgcctgaaca 360
Query: 769 acgtggacaggagctccgcccagaccagggaggtgacggtgagcggtgtgacggtcgtca 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acgtggacaggagctccgcccagaccagggaggtgacggtgagcggtgtgacggtcgtca 420
Query: 829 taacggaatacaaacctaagaagtctgtgactagcagttccagtgatatggagtcctcaa 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taacggaatacaaacctaagaagtctgtgactagcagttccagtgatatggagtcctcaa 480
Query: 889 acgacgcgcgaccttgatctctttatataactatgtctgtacgttaaaataaaaacctat 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgacgcgcgaccttgatctctttatataactatgtctgtacgttaaaataaaaacctat 540
Query: 949 cacgaccggtctaaatatcaataactctgtggtataataaaaacaatgtcttgtatgttt 1008
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacgacccgtctaaatatcaataactctgtggtataataaaaacaatgtcttgtatgttt 600
Query: 1009 attataatagctctgtggcattttttaaaattctcgtgttctaaagacgccatttt 1064
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 601 attataatagctctgtggcatttttttaaattctcgtgttctaaagacgccatttt 656
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,696
Number of extensions: 4429
Number of successful extensions: 4429
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4429
Number of HSP's successfully gapped: 1
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)