BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11816 (UTR included)
(2002 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A2H09 1524 0.0
BF01061B1E01 262 2e-69
BF01019B2H02 115 3e-25
>BF01045A2H09
Length = 802
Score = 1524 bits (769), Expect = 0.0
Identities = 784/790 (99%)
Strand = Plus / Plus
Query: 336 gcaaagtttattttaaaacgtgggtcgcacttagcctatccacttttgaatataaacagt 395
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 13 gcaaagtttattttaaaacgtgggtcggacttagcctatccacttttgaatataaacagt 72
Query: 396 acaaatcctatatgtttgttttttaatatgtttaatgtgataggtgttatttctcgataa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 acaaatcctatatgtttgttttttaatatgtttaatgtgataggtgttatttctcgataa 132
Query: 456 taattcactctttattttaataattttgaagacgaaaccttgaaaatgtggaagaaaaat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 taattcactctttattttaataattttgaagacgaaaccttgaaaatgtggaagaaaaat 192
Query: 516 ctattttctcttattttaaataatggtaattttaaacttagtgaaaatctattaaaaaat 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ctattttctcttattttaaataatggtaattttaaacttagtgaaaatctattaaaaaat 252
Query: 576 gtagcaagcgcacaaatcaggacattgcaaactgaggtcccggtaaaagaagtaaatatc 635
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 253 gtagcaagcacacaaatcaggacattgcaaactgaggtcccagtaaaagaagtaaatatc 312
Query: 636 cctgtaaaatggggccacctggctgcaagactatggggcaatgaaaatgaacagcccata 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cctgtaaaatggggccacctggctgcaagactatggggcaatgaaaatgaacagcccata 372
Query: 696 ctagctttacacggttggcaagataacgccgggacttgggatacgttggcgccattactg 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctagctttacacggttggcaagataacgccgggacttgggatacgttggcgccattactg 432
Query: 756 tgccacaaacgacctatactagcaatcgattttcccggtcatggattatcttcgtggatt 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgccacaaacgacctatactagcaatcgattttcccggtcatggattatcttcgtggatt 492
Query: 816 ccagctggcatgcattactacacctgggatctgcctcgattgattttgtaccttaagaac 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccagctggcatgcattactacacctgggatctgcctcgattgattttgtaccttaagaac 552
Query: 876 tacttcaaatggaataaattatccttgctttgtcattcaatgggttctatagcaggaatg 935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tacttcaaatggaataaattatccttgctttgtcattcaatgggttctatagcaggaatg 612
Query: 936 cgttacgctagtatatttccagaagagatcgcattctacatagcaatcgatagtctaatt 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgttacgctagtatatttccagaagagatcgcattctacatagcaatcgatagtctaatt 672
Query: 996 tatgacgactatgatacagataaagttgttaataattacgcaacaattttgaaaaagatt 1055
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tatgacgactatgatacagataaagttgttaataattacgcaacaattttgaaaaagnnn 732
Query: 1056 caaggtataagtaaatggaaagacgaacctccttcgtatacgatggaagaaattattaaa 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 caaggtataagtaaatggaaagacgaacctccttcgtatacgatggaagaaattattaaa 792
Query: 1116 atttggcatt 1125
||||||||||
Sbjct: 793 atttggcatt 802
>BF01061B1E01
Length = 839
Score = 262 bits (132), Expect = 2e-69
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 1763 catatgagacatcattactagatacattgctggttgtgtcacacacgtgggcacctttac 1822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 catatgagacatcattactagatacattgctggttgtgtcacacacgtgggcacctttac 780
Query: 1823 gggtaggcaatacttgaagtaaagcatctctccaaggaacgccttcacacaccctgagta 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gggtaggcaatacttgaagtaaagcatctctccaaggaacgccttcacacaccctgagta 720
Query: 1883 ctatctcgaaaa 1894
||||||||||||
Sbjct: 719 ctatctcgaaaa 708
>BF01019B2H02
Length = 746
Score = 115 bits (58), Expect = 3e-25
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 1941 cattgttgctttttcatagttaatttattttaatattatacgtaaaaatcgtttgctata 2000
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cattgttgctttttcgtagttaatttattttaatattatacgtaaaaatcgtttgctata 687
Query: 2001 ag 2002
||
Sbjct: 686 ag 685
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,803
Number of extensions: 7919
Number of successful extensions: 7919
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7919
Number of HSP's successfully gapped: 3
Length of query: 2002
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1985
Effective length of database: 8,119,229
Effective search space: 16116669565
Effective search space used: 16116669565
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)