BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN11827 (UTR included)
         (12,841 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01037B2C10                                                          153   8e-36
BF01058A1F04                                                          143   8e-33

>BF01037B2C10
          Length = 811

 Score =   bits (77), Expect = 8e-36
 Identities = 83/85 (97%)
 Strand = Plus / Minus

                                                                       
Query: 84  ctttctttggttatttgtatcacttttgccggattcttacccagttgctaaggtaagcaa 143
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 122 ctttctttggttatttgtatcacttttgccggattcttacccagttgttaaggtaagcaa 63

                                    
Query: 144 aagtcgatttattgatgggagttta 168
           ||||||||| |||||||||||||||
Sbjct: 62  aagtcgattaattgatgggagttta 38


>BF01058A1F04
          Length = 739

 Score =   bits (72), Expect = 8e-33
 Identities = 99/108 (91%)
 Strand = Plus / Minus

                                                                         
Query: 12725 tcttggtcttgttctcgcagcaagagtcgtgcaagtctttcaattacctattagcctgtc 12784
             ||||||||||||||| ||||||| |||| || ||||||| ||||||||||||||||||||
Sbjct: 162   tcttggtcttgttcttgcagcaaaagtcttgtaagtcttgcaattacctattagcctgtc 103

                                                             
Query: 12785 gctatttattaagcgttactttagatattagaacaaagcaacagagta 12832
             ||| |||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 102   gctttttattcaacgttactttagatattagaacaacgcaacagagta 55


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,186
Number of extensions: 17603
Number of successful extensions: 17603
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 17603
Number of HSP's successfully gapped: 2
Length of query: 12841
Length of database: 8,280,457
Length adjustment: 19
Effective length of query: 12822
Effective length of database: 8,100,261
Effective search space: 103861546542
Effective search space used: 103861546542
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)