BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11830 (UTR included)
(1924 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2C10 1346 0.0
BF01027B2C04 1306 0.0
>BF01037B2C10
Length = 811
Score = 1346 bits (679), Expect = 0.0
Identities = 688/691 (99%)
Strand = Plus / Plus
Query: 499 agatgatatttcagcttgtaaggagtattcatacaagcttcgcttgccgtgctgcggagt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 agatgatatttcagcttgtaaggagtattcatacaagcttcgcttgccgtgctgcagagt 180
Query: 559 cttcgcttctggctaaacttagaaagaagactggatataccattgcaaattgcaagaaag 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttcgcttctggctaaacttagaaagaagactggatataccattgcaaattgcaagaaag 240
Query: 619 cccttgaaatgcataacaatgattctgaaaaggctgagacatggttgaatgaacaggcgc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cccttgaaatgcataacaatgattctgaaaaggctgagacatggttgaatgaacaggcgc 300
Query: 679 aagccatgggttgggccaaggctacaaagcttgccggtcggaaggcttcacaggggcttg 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagccatgggttgggccaaggctacaaagcttgccggtcggaaggcttcacaggggcttg 360
Query: 739 tggcggtgaagttcgataagcaacacggtgcgctggtagagttgaattgtgaaactgatt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggcggtgaagttcgataagcaacacggtgcgctggtagagttgaattgtgaaactgatt 420
Query: 799 tcgtagccaagaatgaaaagttccacaaaatgttagaggatgctgcactcgcttgttaca 858
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 421 tcgtagccaagaatgaaaagttccacaaaatgctagaggatgctgcactcgcttgttaca 480
Query: 859 agatggctcacactaatctacaatctaaagggcccatcactaaaatggagttagacagtg 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agatggctcacactaatctacaatctaaagggcccatcactaaaatggagttagacagtg 540
Query: 919 aacaactagggaatatatcagttgagggcaagaagttgtcggaaattttggctcttttca 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacaactagggaatatatcagttgagggcaagaagttgtcggaaattttggctcttttca 600
Query: 979 ttggatcagttggtgagaacgccgttcttagacgcgctgaatgctggaaggcgaatagca 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttggatcagttggtgagaacgccgttcttagacgcgctgaatgctggaaggcgaatagca 660
Query: 1039 aggatgtccagatcacagcctacacccaccccgcgccccccactcctagtgactactcct 1098
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 661 aggatgtccagatcacagcctacacccaccccgcgccccccactcccagtgactactcct 720
Query: 1099 gtgggaaatatggtgctctattggcctacaaacaaccggctgaccttgatgacgtaggca 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtgggaaatatggtgctctattggcctacaaacaaccggctgaccttgatgacgtaggca 780
Query: 1159 agcagatctgccagcacattgtcggctgcgc 1189
|||||||||||||||||||||||||||||||
Sbjct: 781 agcagatctgccagcacattgtcggctgcgc 811
>BF01027B2C04
Length = 758
Score = 1306 bits (659), Expect = 0.0
Identities = 680/688 (98%)
Strand = Plus / Plus
Query: 501 atgatatttcagcttgtaaggagtattcatacaagcttcgcttgccgtgctgcggagtct 560
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 71 atgatatttcagcttgtaaggagtattcatacaagctttgcttgccgtgctgctgagtct 130
Query: 561 tcgcttctggctaaacttagaaagaagactggatataccattgcaaattgcaagaaagcc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tcgcttctggctaaacttagaaagaagactggatataccattgcaaattgcaagaaagcc 190
Query: 621 cttgaaatgcataacaatgattctgaaaaggctgagacatggttgaatgaacaggcgcaa 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cttgaaatgcataacaatgattctgaaaaggctgagacatggttgaatgaacaggcgcaa 250
Query: 681 gccatgggttgggccaaggctacaaagcttgccggtcggaaggcttcacaggggcttgtg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gccatgggttgggccaaggctacaaagcttgccggtcggaaggcttcacaggggcttgtg 310
Query: 741 gcggtgaagttcgataagcaacacggtgcgctggtagagttgaattgtgaaactgatttc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 gcggtgaagttcgataagcaacacggtgcgctggtagagttgaattgtgaaacggatttc 370
Query: 801 gtagccaagaatgaaaagttccacaaaatgttagaggatgctgcactcgcttgttacaag 860
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 371 gtagccaagaatgaaaagttccacaaaatgctagaggatgctgcactcgcttgttacaag 430
Query: 861 atggctcacactaatctacaatctaaagggcccatcactaaaatggagttagacagtgaa 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 atggctcacactaatctacaatctaaagggcccatcactaaaatggagttagacagtgaa 490
Query: 921 caactagggaatatatcagttgagggcaagaagttgtcggaaattttggctcttttcatt 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caactagggaatatatcagttgagggcaagaagttgtcggaaattttggctcttttcatt 550
Query: 981 ggatcagttggtgagaacgccgttcttagacgcgctgaatgctggaaggcgaatagcaag 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggatcagttggtgagaacgccgttcttagacgcgctgaatgctggaaggcgaatagcaag 610
Query: 1041 gatgtccagatcacagcctacacccaccccgcgccccccactcctagtgactactcctgt 1100
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 611 gatgtccagatcacagcctacacccaccccgcgccccccactcccagtgactactcctgt 670
Query: 1101 gggaaatatggtgctctattggcctacaaacaaccggctgaccttgatgacgtaggcaag 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 671 gggaaatatggtgctctattggcctacaaacaaccggctgaccttgatgacgtnnncaag 730
Query: 1161 cagatctgccagcacattgtcggctgcg 1188
||||||||||||||||||||||||||||
Sbjct: 731 cagatctgccagcacattgtcggctgcg 758
Score = 121 bits (61), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 347 gctggtttaatatttttataataacaaaaaattatgattactttaagtgaatattgaagc 406
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gctggtttaatatttttataataacaaaaaannntgattactttaagtgaatattgaagc 60
Query: 407 aataatatta 416
||||||||||
Sbjct: 61 aataatatta 70
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 194,365
Number of extensions: 3619
Number of successful extensions: 3619
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3619
Number of HSP's successfully gapped: 3
Length of query: 1924
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1907
Effective length of database: 8,119,229
Effective search space: 15483369703
Effective search space used: 15483369703
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)