BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11835 (UTR included)
(2284 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2B12 1518 0.0
BF14_736_C1 135 3e-31
BF01031B1D09 94 1e-18
BF01052B2H04 82 4e-15
BF01020B1H07 74 1e-12
BF01011A1B08 74 1e-12
BF01059A2H01 72 4e-12
BF01059B2F03 70 2e-11
>BF01054A2B12
Length = 849
Score = 1518 bits (766), Expect = 0.0
Identities = 828/847 (97%), Gaps = 10/847 (1%)
Strand = Plus / Plus
Query: 1401 tccttcctcgtgggcttcagggtggggctgctcactacattcgctatactcgtccatgaa 1460
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tccttcctcgtgggcttcagagtggggctgctcactacattcgctatactcgtccatgaa 72
Query: 1461 atccctcacgaggtcggtgacttcgcgatcctcctcaagagcggcttctccaggtgggag 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atccctcacgaggtcggtgacttcgcgatcctcctcaagagcggcttctccaggtgggag 132
Query: 1521 gcggcgaaagctcagatcgcgacggctgcggccgggcttttgggggcgatgacggcggtc 1580
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 133 gcggcgaaagctcagatcgcgacggctgcggccgggcttttgggggctatgacggcggtc 192
Query: 1581 gtgttcagcggagccagcaacgctatcgaggcccgcacgtcatggatcgctccgttcacg 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtgttcagcggagccagcaacgctatcgaggcccgcacgtcatggatcgctccgttcacg 252
Query: 1641 gcgggcgggttcctgcacatcgccttggtgacggtgctgcccgagctgctgcgggagcac 1700
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 253 gcgggcggcttcctgcacatcgcgttggtgacggtgctgcccgagctgctgcgggagcac 312
Query: 1701 gaccgcctcgagtccgccaagcacctggccgccttgctggcgggcctggcgctcatggcc 1760
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 313 gaccgcctcgagtccgccaagcacctggccgccttactggcgggcctggcgctcatggcc 372
Query: 1761 gcactcaaccattactgcggatgaacgacactcactcactcactcactcactcatatata 1820
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 373 gcactcaaccattactgcggatgaacgacact--------cactcactcactcatatata 424
Query: 1821 cacagacattcattgaatcaaacgtcagatcgagatgcattcgatcaatcagatatacaa 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacagacattcattgaatcaaacgtcagatcgagatgcattcgatcaatcagatatacaa 484
Query: 1881 tcaccttcatagtaatcttagtgtcgttcattcattcattcctacactgaatataaagcg 1940
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 485 tcaccttcatagtaatcttagtgtcgttcattcattcattcctacactgaatataaagag 544
Query: 1941 cctcgtgtccgaggaccaagtattatatgtccaagcttaggttaagttcatgtaaacaat 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cctcgtgtccgaggaccaagtattatatgtccaagcttaggttaagttcatgtaaacaat 604
Query: 2001 actcaggcaactgtcgctgctcagcgcacagcacgcagcacagcacgctggttacgttac 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 605 actcaggcaactgtcgctgctcagcgcacagcacgcagcacagcacgctggttacgtcac 664
Query: 2061 cttaaacgtatccagaataacaactgtatgagcacctcactagctcctcggttcatttcg 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cttaaacgtatccagaataacaactgtatgagcacctcactagctcctcggttcatttcg 724
Query: 2121 tttcagagcacatccgaatgctatgtacaaccactgcgttagtttaaaaccgaaagttat 2180
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 725 tttcagagcacatccgaatgctttgtacaaccactgcgttagtttaaaac--aaagttat 782
Query: 2181 aagttaaatgtacgataattattgtaattattataatttaccttcgtttagtcaatccag 2240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 783 aagttaaatgtacgataattattgtaattattattatttaccttcgtttagtcaatccag 842
Query: 2241 tagtcag 2247
|||||||
Sbjct: 843 tagtcag 849
>BF14_736_C1
Length = 796
Score = 135 bits (68), Expect = 3e-31
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 711 agcctagctgtggtcaagttgctgcaactcgaacatgggctggctctaccggggaagtac 770
|||||||||||||||||||| || || ||||||||||||||||||| |||||||||||||
Sbjct: 591 agcctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggggaagtac 650
Query: 771 caccctctcacaggagatcgtcgtgaagtagt 802
||||||||||||| |||||| |||||||||||
Sbjct: 651 caccctctcacagaagatcggcgtgaagtagt 682
>BF01031B1D09
Length = 754
Score = 93.7 bits (47), Expect = 1e-18
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 711 agcctagctgtggtcaagttgctgcaactcgaacatgggctggctctaccggggaagtac 770
||||||| |||||||||||| ||||| |||||||| ||||||||| || ||| ||||||
Sbjct: 477 agcctagttgtggtcaagttactgcagctcgaacaagggctggcttgacggggcaagtac 536
Query: 771 caccctctcacaggagatcgtcgtgaagtag 801
||||||||||||| ||||| ||||||||||
Sbjct: 537 caccctctcacagacgatcggcgtgaagtag 567
>BF01052B2H04
Length = 668
Score = 81.8 bits (41), Expect = 4e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 711 agcctagctgtggtcaagttgctgcaactcgaacatgggctggctctaccggggaagtac 770
||||| |||||||||| || || || ||||||||||||||||||| ||||||||||||
Sbjct: 466 agcctggctgtggtcatgtaactacagctcgaacatgggctggctcgtccggggaagtac 407
Query: 771 caccctctcacag 783
|||||||||||||
Sbjct: 406 caccctctcacag 394
>BF01020B1H07
Length = 733
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 742 aacatgggctggctctaccggggaagtaccaccctctcacaggagatcgtcgtgaagtag 801
||||||||||||||| || ||| |||||||| |||||||||| |||||| ||||||||||
Sbjct: 102 aacatgggctggctcgacggggcaagtaccatcctctcacagaagatcggcgtgaagtag 43
Query: 802 t 802
|
Sbjct: 42 t 42
>BF01011A1B08
Length = 853
Score = 73.8 bits (37), Expect = 1e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 742 aacatgggctggctctaccggggaagtaccaccctctcacaggagatcgtcgtgaagtag 801
||||||||||||||| || ||| |||||||| |||||||||| |||||| ||||||||||
Sbjct: 140 aacatgggctggctcgacggggcaagtaccatcctctcacagaagatcggcgtgaagtag 81
Query: 802 t 802
|
Sbjct: 80 t 80
>BF01059A2H01
Length = 865
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 711 agcctagctgtggtcaagttgctgcaactcgaacatgggctggctctaccggggaagtac 770
|||||||||||||||| || || || ||| |||||| ||||||| |||| ||||||||
Sbjct: 343 agcctagctgtggtcacgtaactacagctccaacatgagctggcttgaccgtggaagtac 284
Query: 771 caccctctcacaggagatcg 790
||||||||||||| ||||||
Sbjct: 283 caccctctcacagaagatcg 264
>BF01059B2F03
Length = 703
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 739 tcgaacatgggctggctctaccggggaagtaccaccctctcacaggagatcgtcgtgaag 798
|||||||||||||||||| | ||||||| ||||||| ||||||| |||||| |||||||
Sbjct: 94 tcgaacatgggctggctcgagcggggaatgaccaccccctcacagaagatcggcgtgaag 35
Query: 799 tag 801
|||
Sbjct: 34 tag 32
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,543
Number of extensions: 4220
Number of successful extensions: 4220
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4217
Number of HSP's successfully gapped: 8
Length of query: 2284
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2267
Effective length of database: 8,119,229
Effective search space: 18406292143
Effective search space used: 18406292143
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)