BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11839 (UTR included)
(2419 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_879_C1 1645 0.0
>BF14_879_C1
Length = 917
Score = 1645 bits (830), Expect = 0.0
Identities = 833/834 (99%)
Strand = Plus / Plus
Query: 326 gttaactaaaacaacaaatatggataattggcaagaaaagaaaacgctcataacccgtaa 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 gttaactaaaacaacaaatatggataattggcaagaaaagaaaacgctcataacccgtaa 143
Query: 386 cttacaagaagtgttgggtgatgaaagactcacagaaattttgaaacaacgggacttaaa 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cttacaagaagtgttgggtgatgaaagactcacagaaattttgaaacaacgggacttaaa 203
Query: 446 aatatattggggcaccgcgacaactggaagacctcatgtggcatatttcgtgccaatgtc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aatatattggggcaccgcgacaactggaagacctcatgtggcatatttcgtgccaatgtc 263
Query: 506 taagattgctgattttctaaatgcagggtgtgaggtaacaattttatttgctgacttaca 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taagattgctgattttctaaatgcagggtgtgaggtaacaattttatttgctgacttaca 323
Query: 566 tgcctatttagataacatgaaagcaccatgggagttattatccttgcgaacacaatacta 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcctatttagataacatgaaagcaccatgggagttattatccttgcgaacacaatacta 383
Query: 626 tgaagcagcaatcaaagctatgttaacttccataaatgttcccctagacaaactaaaatt 685
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagcagccatcaaagctatgttaacttccataaatgttcccctagacaaactaaaatt 443
Query: 686 tgttagaggtacagaatatcagctaagcaaagaatacacattggatgtataccgcatgtc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgttagaggtacagaatatcagctaagcaaagaatacacattggatgtataccgcatgtc 503
Query: 746 atctgttataacagatcatgatgcaagaaaagctggtgcagaggttgtaaaacaagttga 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atctgttataacagatcatgatgcaagaaaagctggtgcagaggttgtaaaacaagttga 563
Query: 806 gcatccattactaagtggtctcttgtatcctggcttgcaagcattggatgaagagtattt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcatccattactaagtggtctcttgtatcctggcttgcaagcattggatgaagagtattt 623
Query: 866 aaaggttgatgcacaatttggtggtgttgaccagagaaaaatattcacaatgtctgagaa 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaggttgatgcacaatttggtggtgttgaccagagaaaaatattcacaatgtctgagaa 683
Query: 926 gtatctacctcagctgggctatgccaaaagggtgcaccttatgaatccaatggtaccagg 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtatctacctcagctgggctatgccaaaagggtgcaccttatgaatccaatggtaccagg 743
Query: 986 tctgacaggtggtaaaatgtctgcttcagaagaggacagtaagatagacttattggacaa 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tctgacaggtggtaaaatgtctgcttcagaagaggacagtaagatagacttattggacaa 803
Query: 1046 tccagcaaatgttaagaaaaagcttaagaaagctttctgtgaaccaggcaacattactga 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tccagcaaatgttaagaaaaagcttaagaaagctttctgtgaaccaggcaacattactga 863
Query: 1106 aaatggtgtcctgtcatttactaaacatgttgtgtttccgttaatgaaagctgg 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 aaatggtgtcctgtcatttactaaacatgttgtgtttccgttaatgaaagctgg 917
Score = 159 bits (80), Expect = 3e-38
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 79 gcatgccctgctgtcttacggtgtaccttatattttatatattttgtacctattcattct 138
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 gcatgccctgctgtcttacggtgtaccttatattttatatatattgtacctattcattct 61
Query: 139 tcatgggattctttagataaaagt 162
||||||||||||||||||||||||
Sbjct: 62 tcatgggattctttagataaaagt 85
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 388,204
Number of extensions: 9655
Number of successful extensions: 9655
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9655
Number of HSP's successfully gapped: 2
Length of query: 2419
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2402
Effective length of database: 8,119,229
Effective search space: 19502388058
Effective search space used: 19502388058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)