BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DPGLEAN11855 (UTR included)
         (1999 letters)

Database: est 
           9484 sequences; 8,280,457 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BF01029B2F12                                                           82   4e-15
BF01052B1H02                                                           74   1e-12
BF01037B1H08                                                           74   1e-12

>BF01029B2F12
          Length = 749

 Score = 81.8 bits (41), Expect = 4e-15
 Identities = 86/102 (84%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagtacatattactcaaaaaaatcacattggtacttgccaggtttcgaatccgcaccct 60
           |||||||||||  |||  | |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 610 aaagtacatatgtctctcataaatcacattggtacttgccaggtttcgaacccgcgccct 669

                                                     
Query: 61  catgcacgagaggcgggtctttcgcctcaaggccatcacgac 102
           ||| ||||  || ||||  ||| ||||| |||||| ||||||
Sbjct: 670 catacacgnnagncgggcttttagcctctaggccaccacgac 711


>BF01052B1H02
          Length = 790

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 17  aaaaaaatcacattggtacttgccaggtttcgaatccgcaccctcatgcacgagaggcgg 76
           ||||| |||||||| |||||| ||||| |||||| | ||||||||||| |||||||||||
Sbjct: 478 aaaaagatcacattagtacttcccaggattcgaacctgcaccctcatgtacgagaggcgg 537

                                        
Query: 77  gtctttcgcctcaaggccatcacgacttc 105
           | ||||  |||| |||||| |||| ||||
Sbjct: 538 gcctttaacctctaggccaccacggcttc 566


>BF01037B1H08
          Length = 758

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 89/105 (84%), Gaps = 1/105 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaagtacatattactcaaaaaa-atcacattggtacttgccaggtttcgaatccgcaccc 59
           ||||||||||| ||||  |||| |||||||||||||||||||||||||||| |||| || 
Sbjct: 173 aaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccgcgcct 114

                                                        
Query: 60  tcatgcacgagaggcgggtctttcgcctcaaggccatcacgactt 104
           ||| | | |||||||||| ||||  |||| ||||||  |||||||
Sbjct: 113 tcacgtatgagaggcgggcctttaacctccaggccacaacgactt 69


  Database: est
    Posted date:  Jul 14, 2011  2:25 PM
  Number of letters in database: 8,280,457
  Number of sequences in database:  9484
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,023
Number of extensions: 5275
Number of successful extensions: 5275
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5274
Number of HSP's successfully gapped: 3
Length of query: 1999
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1982
Effective length of database: 8,119,229
Effective search space: 16092311878
Effective search space used: 16092311878
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)