BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11885 (UTR included)
(2878 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1506_C1 1340 0.0
>BF14_1506_C1
Length = 894
Score = 1340 bits (676), Expect = 0.0
Identities = 700/708 (98%)
Strand = Plus / Plus
Query: 496 gccaaatggataatttagctgaaaatagtacaaaaaaggggggtactgatcttgaaactc 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gccaaatggataatttagctgaaaatagtacaaaaaaggggggtactgatcttgaaactc 246
Query: 556 tagattatctccgcggtgtgaaatcttcaacgtgtctacttcttcccatgactccgagcc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tagattatctccgcggtgtgaaatcttcaacgtgtctacttcttcccatgactccgagcc 306
Query: 616 ctacccagttggattttaaacatccactctccgaagaaatgactgaaggtgcttttttga 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctacccagttggattttaaacatccactctccgaagaaatgactgaaggtgcttttttga 366
Query: 676 cactgaatgatgatccaaaaatagttgatcttcaatgctctcctgatccttgtagtggag 735
| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cgctgaatgatgattcaaaaatagttgatcttcaatgctctcctgatccttgtagtggag 426
Query: 736 attcaagttcatcagcagattctaactcggtagtccaagatcctgtcagtgctcaactta 795
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 427 attcaagttcatcggcagattctaactcagtagtccaagatcctgtcagtgctcaactta 486
Query: 796 tcaataacataagcatgttggactatcagactttgagtaaaaatggcgacattattggac 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcaataacataagcatgttggactatcagactttgagtaaaaatggcgacattattggac 546
Query: 856 agcctgaaatctgtaaactaaacggaagcttaaatgtgagcaataggaaactaccacatt 915
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agcctgaaatctgtaaacttaacggaagcttaaatgtgagcaataggaaactaccacatt 606
Query: 916 ttgttaactggaattggtgcattataaggaaggttctactatggtttgttgtttccggac 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttgttaactggaattggtgcattataaggaaggttctactatggtttgttgtttccggac 666
Query: 976 ttgttgcatgcactggtactattatagctatggttatcaatataccaaaagaatgtaacc 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttgttgcatgcactggtactattatagctatggttatcaatataccaaaagaatgtaacc 726
Query: 1036 cagatctaccctggtatcaaggtaaggtattttatgaaatattccctgccagtttcaagg 1095
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cagatctaccgtggtatcaaggtaaggtattttatgaaatattccctgccagtttcaagg 786
Query: 1096 actcaaacaatgatggcatgggtgacttgaagggacttatcaagaagttggattacataa 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 actcaaacaatgatggcatgggtgacttgaagggacttatcaagaagttggattacataa 846
Query: 1156 aagatttaggcggctcatctatccgtttgaattatatatttgaggcgc 1203
||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 847 aagatttaggcggctcatcaatccgtttaaattatatatttgaggcgc 894
Score = 309 bits (156), Expect = 1e-83
Identities = 171/175 (97%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 246 gaatgtttcgcaatacagcctatattaggcatttatgtttatttgagctagattaatttt 305
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 13 gaatgtttcgcaatacagcctatattaggcatttatgtttttttgagctagattaatttt 72
Query: 306 taactgtttagtttcatagtgacatcgtcatatcattcactgaactaatatttattatac 365
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 taactgtttagtttcatagcgacatcgtcatatcattcactgaactaatatttattatac 132
Query: 366 gttataactactaaatgaagaatatttaatt--aagttttggattacgacctagg 418
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 133 gttataactactaaatgaagaatatttaattaaaagttttggattacgacctagg 187
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 373,627
Number of extensions: 7147
Number of successful extensions: 7147
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7146
Number of HSP's successfully gapped: 2
Length of query: 2878
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2861
Effective length of database: 8,119,229
Effective search space: 23229114169
Effective search space used: 23229114169
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)