BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11886 (UTR included)
(2896 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A1G10 1380 0.0
BF01026A2E02 735 0.0
>BF01030A1G10
Length = 716
Score = 1380 bits (696), Expect = 0.0
Identities = 702/704 (99%)
Strand = Plus / Plus
Query: 2019 gcgattttcgcttggggtatattaataaaaggggcatttttacccgaacccttcacctac 2078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcgattttcgcttggggtatattaataaaaggggcatttttacccgaacccttcacctac 72
Query: 2079 atgtatggtagtgtgcaattagtatttgtgcagataccgttaatattcgtactcgcccat 2138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtatggtagtgtgcaattagtatttgtgcagataccgttaatattcgtactcgcccat 132
Query: 2139 tgtttggaaacaaaacttttaaatccaaatatgagaggcttgaagcgtctttttaagaat 2198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tgtttggaaacaaaacttttaaatccaaatatgagaggcttgaagcgtctttttaagaat 192
Query: 2199 ttaccatttatattcctgttctcgatccagctattgctggcatacttcttttggttagag 2258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttaccatttatattcctgttctcgatccagctattgctggcatacttcttttggttagag 252
Query: 2259 tatgggacgatatcatttttgttcggacctctaagaacgtggagcgttgtgctaagtttg 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatgggacgatatcatttttgttcggacctctaagaacgtggagcgttgtgctaagtttg 312
Query: 2319 ctgctttggtacaaaacattgactttgccaccggaatactacaggtatttgtccaaattg 2378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgctttggtacaaaacattgactttgccaccggaatactacaggtatttgtccaaattg 372
Query: 2379 aacgagatgccgtcttagtcacatgggccgtcgatgaccgatgccctaaaatatttttgt 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aacgagatgccgtcttagtcacatgggccgtcgatgaccgatgccctaaaatatttttgt 432
Query: 2439 attgaacttatattaagcatttaatgtatattcaatgtacataatagtcacttgttaagt 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 attgaacttatattaagcatttaatgtatattcaatgtacataatagtcacttgttaagt 492
Query: 2499 ctacgctaacgagagtatttatcaccaaagacagatataaatactaaaaatcattcctgt 2558
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 493 ctacgctaacgagagtatttatcaccaaagacagatataaatacttaaaatcattcctgt 552
Query: 2559 ttataatattttaagctttccatattatacattgaataattgtagacaaagtatggaaat 2618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttataatattttaagctttccatattatacattgaataattgtagacaaagtatggaaat 612
Query: 2619 caaaatatgtatacgtatatatgattataatttgaacaatttttacacaaactaactaac 2678
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 613 caaaatatgtatacgtatatatgattattatttgaacaatttttacacaaactaactaac 672
Query: 2679 aattaataaagtcaattctcataaaaacgagaacagcgtgaaga 2722
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aattaataaagtcaattctcataaaaacgagaacagcgtgaaga 716
>BF01026A2E02
Length = 735
Score = 735 bits (371), Expect = 0.0
Identities = 378/381 (99%)
Strand = Plus / Plus
Query: 264 ggaaaatgtagataagctaggtcgatttttgttgacaaagaaattatactcttgcatcag 323
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ggaaaatgtagataagctaggtcgatttttgttgacnnagaaattatactcttgcatcag 60
Query: 324 tctttgtgtttagtgtcgaagacaatgaccacaataaaaaaattaaaagcactggcacac 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctttgtgtttagtgtcgaagacaatgaccacaataaaaaaattaaaagcactggcacac 120
Query: 384 cgcagttaaatcattttatcgattttaacttatattttttgtttcggtgttttcaacatg 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcagttaaatcattttatcgattttaacttatattttttgtttcggtgttttcaacatg 180
Query: 444 attttctctaagatagccttatccatcgtcttttttctattgcttttgtcgatatttatg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attttctctaagatagccttatccatcgtcttttttctattgcttttgtcgatatttatg 240
Query: 504 gcaagccttttaaatattatagctacagatcacaacttttacaacgaagataagaatgaa 563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaagtcttttaaatattatagctacagatcacaacttttacaacgaagataagaatgaa 300
Query: 564 agagaaaatttcacaaaatatttgggagacaagtatggtccaatcactgattcaaccaaa 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagaaaatttcacaaaatatttgggagacaagtatggtccaatcactgattcaaccaaa 360
Query: 624 aatttaatgtggttcttacag 644
|||||||||||||||||||||
Sbjct: 361 aatttaatgtggttcttacag 381
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 404,505
Number of extensions: 9274
Number of successful extensions: 9274
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9274
Number of HSP's successfully gapped: 2
Length of query: 2896
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2878
Effective length of database: 8,109,745
Effective search space: 23339846110
Effective search space used: 23339846110
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)