BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11895 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_486_C1 597 e-170
>BF14_486_C1
Length = 3127
Score = 597 bits (301), Expect = e-170
Identities = 344/359 (95%), Gaps = 7/359 (1%)
Strand = Plus / Plus
Query: 1113 tatcggcgcaagcagcttcaatgacggatgcaacatggaaataactcaagactggcatca 1172
||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||
Sbjct: 2664 tatcggcgcaagcagcttcaacgacggatgcaacatgaaaataact-------ggcacca 2716
Query: 1173 attattataacaccttattggtcgtcgttactattgttaaaagtaaaacgaaatcaaaga 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2717 attattataacaccttattggtcgtcgttactattgttaaaagtaaaacgaaatcaaaga 2776
Query: 1233 gaatagaactatgtttgaattctggtttaaatatgacgtctggacgcacgacaggggact 1292
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2777 gaatagaactatgtttgaattctggtttaaatatgacgtctggacgcacgacaggggacg 2836
Query: 1293 gcagagttcagcgagtgcggagcataaagaaccttcgagaaatacaagaacatttagaag 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2837 gcagagttcagcgagtgcggagcataaagaaccttcgagaaatacaagaacatctagaag 2896
Query: 1353 aattgaagtttcattttaaaatatctggaacttactgaaacaagtgacattagagacgtc 1412
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 2897 aattgaagtttcattttaaaatatctggaacgtactgaaacaagtgacattagagacgcc 2956
Query: 1413 agcgaggctggcgtcctgtctttaaaacaatgaatttataataaaatccgatatatata 1471
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2957 agcgaggctggcgtcctgtctttaaaataatgaatttataataaaatccgatatatata 3015
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1414 gcgaggctggcgtcctgtctttaaaacaatgaatttataataaaatccgatat 1466
|||||||||||||||||| ||||||||||||||||| |||| |||||||||||
Sbjct: 1 gcgaggctggcgtcctgtttttaaaacaatgaatttgtaattaaatccgatat 53
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 223,848
Number of extensions: 4562
Number of successful extensions: 4562
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4562
Number of HSP's successfully gapped: 3
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)