BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11920 (UTR included)
(1630 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_619_C1 321 2e-87
BF01019A1H08 115 2e-25
BF14_335_C4 86 2e-16
BF14_335_C2 84 8e-16
BF01044B1A07 78 5e-14
BF01042A1B12 78 5e-14
BF01049B1F01 70 1e-11
BF01056B2D01 68 5e-11
>BF14_619_C1
Length = 793
Score = 321 bits (162), Expect = 2e-87
Identities = 240/266 (90%), Gaps = 5/266 (1%)
Strand = Plus / Minus
Query: 198 tttcgatttgactgtagctgttagccctattggcttttacagcgtcaccggaaggggtgg 257
|||||| ||| |||||||||||| |||||||||||||||||| | |||||| || |||||
Sbjct: 281 tttcgacttgtctgtagctgttaaccctattggcttttacagtgccaccgggagtggtgg 222
Query: 258 gtggcccgatgggatcttcccgtttaattcgggcccgaagggcctgacggagggatatgc 317
||||||||||| | || || ||||||||| ||||||||||||| ||||||| ||| ||
Sbjct: 221 atggcccgatggaacctaccagtttaattcaggcccgaagggcccgacggagatatacgc 162
Query: 318 ccatcccaagggtgcctctaagaggccggacctcggcttaggacgtcgttgaagtgga-- 375
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 161 ccgtcccaagggtgcctctaagaggccggacctcggcttagtacgtcgttgaagtggagt 102
Query: 376 ---ggatggcatcggaagatgagattgcatgacgccccccgacggcagaacgccggagcg 432
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gggggatggcatcggaagatgggattgcatgacgccccccgacggcagaacgccggagcg 42
Query: 433 acgtgtaagaaacgggacctcgtctt 458
||| ||||||||||||||||||||||
Sbjct: 41 acgcgtaagaaacgggacctcgtctt 16
>BF01019A1H08
Length = 504
Score = 115 bits (58), Expect = 2e-25
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 634 taaacctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacgcg 693
||||||||||| |||||||||| || ||| ||||| |||||||||||||||||||||||
Sbjct: 476 taaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcg 417
Query: 694 atggatgcgtcacccgcacggtgaatccatggaatactaaga 735
||||| || |||||||||||||||||||| |||| ||||||
Sbjct: 416 atggacccggcacccgcacggtgaatccattgaatgctaaga 375
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 535 taaacctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacgc 593
||||||||||| |||||||||| || ||| ||||| ||||||||||||||||||||||
Sbjct: 476 taaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgc 418
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 2e-16
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 634 taaacctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacgcg 693
||||||||||| ||||||||||||| ||| ||||| ||||||||||| |||||||||||
Sbjct: 1253 taaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcg 1311
Query: 694 atggatgcgtcacccgcacggtgaatccatggaat 728
|||| | || ||||||||||||||||||||||
Sbjct: 1312 atggtccccgcaaccgcacggtgaatccatggaat 1346
>BF14_335_C2
Length = 1827
Score = 83.8 bits (42), Expect = 8e-16
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 634 taaacctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacgcg 693
||||||||||| || ||||||| || ||| ||||| |||||||||||||||||||||||
Sbjct: 920 taaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcg 861
Query: 694 atggatgcgtcacccgcacggtgaatccat 723
||| || ||||||||||||||||||||
Sbjct: 860 gcggacccggcacccgcacggtgaatccat 831
>BF01044B1A07
Length = 806
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 641 acacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacgcgatggatg 700
|||| ||| |||| |||| ||||||| | ||||||||||||||||| ||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 701 cgtcacccgcacggtgaatccat 723
|| ||||||||||||||||||||
Sbjct: 472 cgccacccgcacggtgaatccat 450
>BF01042A1B12
Length = 787
Score = 77.8 bits (39), Expect = 5e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 311 gatatgcccatcccaagggtgcctctaagaggccggacctcggcttaggacgtcgttgaa 370
|||| |||| |||||||||||||||||| ||||| || ||| ||| ||||||||||||||
Sbjct: 559 gatacgcccgtcccaagggtgcctctaaaaggccagatctcagct-aggacgtcgttgaa 617
Query: 371 gtggaggatggcatc 385
| |||||||||||||
Sbjct: 618 ggggaggatggcatc 632
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 637 acctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacg 691
|||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 538 acctacacttgggtcgcaagtctcagacactgcagaagctcctctccctgcaacg 592
|||||||| ||||||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF01056B2D01
Length = 728
Score = 67.9 bits (34), Expect = 5e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 671 gaagctcctctccctgcaacgcgatggatgcgtcacccgcacggtgaatccatggaat 728
||||||||||||||||||| | |||||| || |||||||||||||||| ||||||||
Sbjct: 151 gaagctcctctccctgcaatgtgatggacccggcacccgcacggtgaattcatggaat 94
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,936
Number of extensions: 4303
Number of successful extensions: 4303
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4299
Number of HSP's successfully gapped: 10
Length of query: 1630
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1613
Effective length of database: 8,119,229
Effective search space: 13096316377
Effective search space used: 13096316377
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)