BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11933 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3411_C1 2313 0.0
>BF14_3411_C1
Length = 1200
Score = 2313 bits (1167), Expect = 0.0
Identities = 1190/1199 (99%)
Strand = Plus / Plus
Query: 11 aggttgtttttaccaacaaagtgaattaacaatttagagataacaataaatacacgtaaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggttgtttttaccaacaaagtgaattaacaatttagagataacaataaatacacgtaaa 61
Query: 71 catgtgagtaaatatgaacgtgttcaaccaaatcacaaacacatagtcatttagtcctat 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62 catgtgagtaaatatgaacgtgttcaaccaaatcacaaacacatagtcatttagtactat 121
Query: 131 atcgcattgcgtagaacaaacacccattttatgtttaacaagtgataacctctagtgctg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcgcattgcgtagaacaaacacccattttatgtttaacaagtgataacctctagtgctg 181
Query: 191 tttgttaatacaattttgataaagatactgtgcgattcctgattacataatggctcttaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tttgttaatacaattttgataaagatactgtgcgattcctgattacataatggctcttaa 241
Query: 251 ctataataagtttcctcaactaatatcagcgttttgtaacttgaacaattttagaacatt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctataataagtttcctcaactaatatcagcgttttgtaacttgaacaattttagaacatt 301
Query: 311 gtcaacgacttgttcgaataaggcaaaaataaattttaactgggaagaccctttgaattt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtcaacgacttgttcgaataaggcaaaaataaattttaactgggaagaccctttgaattt 361
Query: 371 agatcgactattacttgacgatgaaaaggcagttcgagactctgtgaaaacgtattgtca 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agatcgactattacttgacgatgaaaaggcagttcgagactctgtgaaaacgtattgtca 421
Query: 431 agagaaactattgcctagagtggttcaagctaatagaaatgaaacgtttgatcgggctat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agagaaactattgcctagagtggttcaagctaatagaaatgaaacgtttgatcgggctat 481
Query: 491 ttacaaagaaatgggtgagttaggtattcttggctgtacaattaagggctacgattgtgc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttacaaagaaatgggtgagttaggtattcttggctgtacaattaagggctacgattgtgc 541
Query: 551 cggagtatcatcggttacatatggacttataacaagagaattggatggtgtagactcgtc 610
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 542 cggagtatcatcggttacatatggacttataacaagagaattggatggtgtagattcgtc 601
Query: 611 ttatagatccgctatgagtgtacagagtagtttagcaatgggtgctatttatatgtatgg 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttatagatccgctatgagtgtacagagtagtttagcaatgggtgctatttatatgtatgg 661
Query: 671 ttcagaggaacaaaagcaaaaatatttaccaaaaatggcaaaaggtgatctagtcggctg 730
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 662 ttcagaggaacaaaagcaaaaatatttaccaaaaatggcaaagggtgatctagtcggctg 721
Query: 731 ttttggtctaactgaacccaattacggtagtgacgccggcgggttagtaacaagggcgaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttttggtctaactgaacccaattacggtagtgacgccggcgggttagtaacaagggcgaa 781
Query: 791 atatgattctaaatcgaaatcttatgtcctgagtggttcaaaaacgtggattacgaactc 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atatgattctaaatcgaaatcttatgtcctgagtggttcaaaaacgtggattacgaactc 841
Query: 851 tcctatagcagatatacttattatttgggctaaagatgaggaaaataaagtaagaggctt 910
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 842 tcctatagcagatatacttattatttgggctaaagatgaggaaaataaagtaaggggctt 901
Query: 911 tattgtggatagaagcctagtaaataaaggtctagacacgcctaaaattgaaggaaaatt 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tattgtggatagaagcctagtaaataaaggtctagacacgcctaaaattgaaggaaaatt 961
Query: 971 ttctttaagagcttcccaaacgggtatgatattgctcgacgaagtagttataccagagga 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ttctttaagagcttcccaaacgggtatgatattgctcgacgaagtagttataccagagga 1021
Query: 1031 gagtttattacccggggtattgggtatgaaggggcctttcggatgtctcaataatgcgag 1090
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gagtttactacccggggtattgggtatgaaggggcctttcggatgtctcaataatgcgag 1081
Query: 1091 atacgggatcgcttggggcgctctcggtgcggccgaatcgtgtttgcggattgctcgaca 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atacgggatcgcttggggcgctctcggtgcggccgaatcgtgtttgcggattgctcgaca 1141
Query: 1151 gtacacattagatcggaaacaatttggaaaaccgctcgcttcgaaccagctgatacaaa 1209
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 gtacacattagatcgnnnncaatttggaaaaccgctcgcttcgaaccagctgatacaaa 1200
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 257,435
Number of extensions: 5713
Number of successful extensions: 5713
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5713
Number of HSP's successfully gapped: 1
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)