BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11940 (UTR included)
(1777 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2A01 670 0.0
BF01016A2H12 658 0.0
BF01013A2C01 440 e-123
>BF01042A2A01
Length = 771
Score = 670 bits (338), Expect = 0.0
Identities = 375/386 (97%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 656 acgtcagttctatgacggacagaagtcagaattcagtgacggccgtaagaggcgttgtat 715
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acgttagttctatgacggacagaagtcagaattcagtgacggccgtaagaggcgttgtat 326
Query: 716 taatgcatgctgcgtacaagatagtaaatggaggggctcaaattctaaaaacataagcaa 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatgcatgctgcgtacaagatagtaaatggaggggctcaaattctaaaaacataagcaa 266
Query: 776 cggctacaaattgattgattatggcgaaactaacaatagaaatggagtaggcgtaatact 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cggctacaaattgattgattatggcgaaactaacaatagaaatggagtaggcgtaatact 206
Query: 836 ctcggaagacttatcgcggagattggtaagtgtcgttagggtaggcgatcgaataatact 895
|||||||||||| | | ||||||||| |||| ||||||||||| || |||||||||||||
Sbjct: 205 ctcggaagacttgtag-ggagattggcaagtttcgttagggtaagccatcgaataatact 147
Query: 896 caaaatcaccctcgacaaccaaccaagcctgaacatcatctcgatttacgctccacaatc 955
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 caaaattaccctcgacaaccaaccaagcctgaacatcatctcgatttacgctccacaatc 87
Query: 956 gggaagcgaagaatttaataaagatatattctgggacgtactttacaaattattattaga 1015
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 86 gggaagcgaagaatttaataaagatatattctgggacgtactttacaaattattatgaga 27
Query: 1016 gatacctactgaagaaacggtgcatc 1041
||||||||||||||||||||| ||||
Sbjct: 26 gatacctactgaagaaacggtacatc 1
Score = 440 bits (222), Expect = e-123
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 427 gctcgctgaaaggataaatctttccagggggcagaagagaaacaaaatacctcccgcgga 486
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 771 gctcgctgaaaggataaatctttccagggggcagaagagaaacaaaatanntcccgcgga 712
Query: 487 tcacaaggccggagatggaaactccgtcatcaaaccccatctacaggcttcttagacata 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ccacaaggccggagatggaaactccgtcatcaaaccccatctacaggcttcttagacata 652
Query: 547 ttctaagtagaggctgcagacgtgctgagtgctgggtggagtactcagtaggggaggcgg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ttctaagtagaggctgcagacgtgctgagtgctgggtggagtactcagtaggggaggcgg 592
Query: 607 cggaagaactttcgggtcaacggcagcccccaggccctccacgagggtcacgtcag 662
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 591 cggaagaactttcgggtcaacggcggcccccaggccctccacgagggtcacgtcag 536
>BF01016A2H12
Length = 747
Score = 658 bits (332), Expect = 0.0
Identities = 341/344 (99%)
Strand = Plus / Minus
Query: 319 gttaataaatatgttagtttcaatgataattgaaatattatattgtcataaaggggtcga 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gttaataaatatgttagtttcaatgataattgaaatattatattgtcataaaggggtcga 685
Query: 379 ggtagcttgattcccgagcccgcgtccacaagcggcggatagtgggatgctcgctgaaag 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggtagcttgattcccgagcccgcgtccacaagcggcggatagtgggatgctcgctgaaag 625
Query: 439 gataaatctttccagggggcagaagagaaacaaaatacctcccgcggatcacaaggccgg 498
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 624 gataaatctttccagggggcagaagagaaacaaaatacctcccgcggaccacaaggccgg 565
Query: 499 agatggaaactccgtcatcaaaccccatctacaggcttcttagacatattctaagtagag 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 564 agatggaaactccgtcatcaaaccccatctacaggcttcttagacatattctaaggagag 505
Query: 559 gctgcagacgtgctgagtgctgggtggagtactcagtaggggaggcggcggaagaacttt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctgcagacgtgctgagtgctgggtggagtactcagtaggggaggcggcggaagaacttt 445
Query: 619 cgggtcaacggcagcccccaggccctccacgagggtcacgtcag 662
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 cgggtcaacggcggcccccaggccctccacgagggtcacgtcag 401
Score = 365 bits (184), Expect = e-100
Identities = 224/236 (94%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 695 cggccgtaagaggcgttgtattaatgcatgctgcgtacaagatagtaaatggaggggctc 754
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 235 cggccgtaagaggcgttgtattaatgcatgctgcgtacaagatagtaaatggagggactc 176
Query: 755 aaattctaaaaacataagcaacggctacaaattgattgattatggcgaaactaacaatag 814
|||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 175 aaattctaaagacataagcagcggctacaaattgatttattatggcgaaactaacaatag 116
Query: 815 aaatggagtaggcgtaatactctcggaagacttatcgcggagattggtaagtgtcgttag 874
||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 115 aaatggagtaggcgtaatactctcggaagacttatcg-agagattggcaagtttcgttag 57
Query: 875 ggtaggcgatcgaataatactcaaaatcaccctcgacaaccaaccaagcctgaaca 930
|||| || ||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 56 ggtaagccatcgaataatactcagaattaccctcgacaaccaaccaagcctgaaca 1
>BF01013A2C01
Length = 848
Score = 440 bits (222), Expect = e-123
Identities = 225/226 (99%)
Strand = Plus / Minus
Query: 1 ttactataacttacttagtacacgataagttgattaaaaatgtatgtaacactatcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttactataacttacttagtacacgataagttgattaaaaatgtatgtaacactatcataa 187
Query: 61 tacagagtttatttatgtgagtttgttttattaaggtaaaagatgcattaatatctaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tacagagtttatttatgtgagtttgttttattaaggtaaaagatgcattaatatctaata 127
Query: 121 taaaaacattatattgtaaggcttgattgaaaatactacgattagaaaatctaaattgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 taaaaacattatattgtaaggcttgattgaaaatactacgattagaaaatctaaattgtt 67
Query: 181 ttaacgtaagaaaaattgtgaattctatttgatgtgaattgtgaac 226
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 66 ttaacgtaagaaaaattgtgaattctacttgatgtgaattgtgaac 21
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,801
Number of extensions: 3379
Number of successful extensions: 3379
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3377
Number of HSP's successfully gapped: 5
Length of query: 1777
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1760
Effective length of database: 8,119,229
Effective search space: 14289843040
Effective search space used: 14289843040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)