BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11947 (UTR included)
(1763 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_999_C1 874 0.0
>BF14_999_C1
Length = 907
Score = 874 bits (441), Expect = 0.0
Identities = 468/477 (98%)
Strand = Plus / Plus
Query: 105 agtcagttacattacgatggcttccaacctatagccgcgactctatcagccgctgtacac 164
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 110 agtcagttacattacgatggtttccaacctatagccgcgactctatcagccgctgtacac 169
Query: 165 gcagacccaccgtgccctccgagcgacagattattaaatctaatgatggtcggtctacaa 224
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 170 gcagacccaccatgccctccgagcgacagactattaaatctaatgatggtcggtctacaa 229
Query: 225 catgaaccggaccggaaggacaggctggcggcatccagcggggcggaacatctgctggga 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 catgaaccggaccggaaggacaggctggcggcatccagcggggcggaacatctgctggga 289
Query: 285 actaccggctttgatctcgagtttgagatggacgcgtcctcgctcgcccctgagccggcc 344
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 290 actaccggcttcgatctcgagtttgagatggacgcgtcctcgctcgccccagagccggcc 349
Query: 345 acgtacgagacggcgtatgtgacgtcacacaagatgtcttgtagggccggagcgttcagc 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acgtacgagacggcgtatgtgacgtcacacaagatgtcttgtagggccggagcgttcagc 409
Query: 405 gcctgtggtcagctggtggctaccggcagtgtggatgctagcattaagattctggacgtg 464
|||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 410 gcctgtggccagctggtggctaccggcagtgttgatgctagtattaagattctggacgtg 469
Query: 465 gagcggatgttggctaaatcagctcccgaggaagttgatcccgggagagagcaacaggga 524
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 470 gagcggatgttggctaaatcagctcccgaggaagttgatcccgggagagagcagcaggga 529
Query: 525 catccggtgatacgaacattatacgatcacaccgacgagataaccgccctggatttc 581
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 catccggtgatacgaacattatacgatcacaccgacgagataaccgccctggatttc 586
Score = 115 bits (58), Expect = 2e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 782 gttttcaccgaacggtaagtattacgcgtcgggcagcgctgatggtagcgtcaagctc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gttttcaccgaacggtaagtattacgcgtcgggcagcgctgatggtagcgtcaagctc 907
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,337
Number of extensions: 17073
Number of successful extensions: 17073
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17073
Number of HSP's successfully gapped: 2
Length of query: 1763
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1746
Effective length of database: 8,119,229
Effective search space: 14176173834
Effective search space used: 14176173834
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)