BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11949 (UTR included)
(930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1425_C1 541 e-154
>BF14_1425_C1
Length = 1144
Score = 541 bits (273), Expect = e-154
Identities = 282/285 (98%)
Strand = Plus / Plus
Query: 548 agcgtcatctcaggctgctcgcgacgcttcctgtcctcggatatgcggcccggcgcttca 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agcgtcatctcaggctgctcgcgacgcttcctgtcctcggatatgcggcccggcgcttca 251
Query: 608 aggcgagccagtgtgtgctacggatggagttatatacccatcactgtgtgagatgcggaa 667
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aggcgagccggtgtgtgctacggatggagttatatacccatcactgtgtgagatgcggaa 311
Query: 668 gaagacttgtgggaaaggtgtaaagctggccccagatcaaagcgtatgctcccgtgctca 727
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaagacttgtgggaaaggtgtaaagctggccccagatcaaagcgtatgctcccgtgctca 371
Query: 728 aggcagcaagtgcgagaatcgttgcacaacagaacgagaccctgtctgtggtaccaatgg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aggcagcaagtgcgagaatcgttgcacaacagaacgagaccctgtctgtggtaccaatgg 431
Query: 788 acggacctatctgaatagatgcatgctgcaagttgagatttgcag 832
||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 432 acggacctatctgaacagatgcatgctgcaagttgagatttgcag 476
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 125,289
Number of extensions: 2970
Number of successful extensions: 2970
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2970
Number of HSP's successfully gapped: 1
Length of query: 930
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 913
Effective length of database: 8,119,229
Effective search space: 7412856077
Effective search space used: 7412856077
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)