BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11958 (UTR included)
(2074 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2423_C1 1253 0.0
>BF14_2423_C1
Length = 1170
Score = 1253 bits (632), Expect = 0.0
Identities = 650/655 (99%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 1130 ggtatgcagtgctgaatttgatcgcaaggatataccaatgaataaacttgtagcaacaac 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggtatgcagtgctgaatttgatcgcaaggatataccaatgaataaacttgtagcaacaac 577
Query: 1190 attagaaggcaaatttcatgttttcgatttaagaactcaaaatccaacaaaaggctttgc 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 attagaaggcaaatttcatgttttcgatttaagaactcaaaatccaacaaaaggctttgc 637
Query: 1250 acaggttctggataactctgctaaaagtggaacaatttgggttgctcgccatttacctca 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acaggttctggataactctgctaaaagtggaacaatttgggttgctcgccatttacctca 697
Query: 1310 gaatcgtgatttgtttataacatgtgctgggaacggccaggtgtcgttgtggaaatacca 1369
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 698 gaatcgtgatttgtttataacatgtgctgggaacggtcaggtgtcgttgtggaaatacca 757
Query: 1370 gtatcccgaacagcggtcacacgtcgattcaaatggcgtgacagtaggcgtcgcgggaaa 1429
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 758 gtatcccgaacagcggtcacacgtcgattcaaatggcgtgacagttggcgtcgcgggaaa 817
Query: 1430 attgaaccgtctgcagcgcatggttgtcagctctcagccaatcaacgctctcgattggaa 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 attgaaccgtctgcagcgcatggttgtcagctctcagccaatcaacgctctcgattggaa 877
Query: 1490 cagagaccacacgggattggctgttgccacagcttacgaccagtgcgtcagagttatagt 1549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 cagagaccacacgggattggctgttgccacagcttacgaccagtgcgtcagagttatagt 937
Query: 1550 tacaactaaacttaatctacattgatataaaagtttctttgtaggtacaattaaattact 1609
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 938 tacaactaaacttaatctacattgatat--aagtttctttgtaggtacaattaaattact 995
Query: 1610 cttgaatatttaatttcaaaggagtaaattctgtatccgagctttcatgtgtgtatgtaa 1669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 cttgaatatttaatttcaaaggagtaaattctgtatccgagctttcatgtgtgtatgtaa 1055
Query: 1670 aactaagattcttttttttaaagtacggaatacgatctggattggattttcaatgtttaa 1729
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 aactaagattctgttttttaaagtacggaatacgatctggattggattttcaatgtttaa 1115
Query: 1730 gaatttatttatttggacttactttattacacatcgggatgtaacaagaatctcc 1784
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 gaatttatttatttggacttactttattacacatcgggatgtaacaagaatctcc 1170
Score = 694 bits (350), Expect = 0.0
Identities = 353/354 (99%)
Strand = Plus / Plus
Query: 780 atatgggatttagaaaaaagttctcaggtttacatcaccaaggagcacacggatattata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atatgggatttagaaaaaagttctcaggtttacatcaccaaggagcacacggatattata 61
Query: 840 aattcaattgatggaatgggtggaaacactgttaactgtggtgctccagagattgttact 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aattcaattgatggaatgggtggaaacactgttaactgtggtgctccagagattgttact 121
Query: 900 ggtagtagagacgggacagtgaaagtttgggatcctcgtcaaagaggcaaggctgtggct 959
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggcagtagagacgggacagtgaaagtttgggatcctcgtcaaagaggcaaggctgtggct 181
Query: 960 aacatgcagccagctaaaggtgaaataaaacgagattgctgggctgttgcatttggaaac 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aacatgcagccagctaaaggtgaaataaaacgagattgctgggctgttgcatttggaaac 241
Query: 1020 tcattcaatgatgccgagagaattgtcattgccggttatgacaatggtgacttaaaaatg 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcattcaatgatgccgagagaattgtcattgccggttatgacaatggtgacttaaaaatg 301
Query: 1080 tttgatttacgaactatgtccctgaggtgggaatgtaacttaaaaaatggggta 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tttgatttacgaactatgtccctgaggtgggaatgtaacttaaaaaatggggta 355
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,657
Number of extensions: 6669
Number of successful extensions: 6669
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6668
Number of HSP's successfully gapped: 2
Length of query: 2074
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2057
Effective length of database: 8,119,229
Effective search space: 16701254053
Effective search space used: 16701254053
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)