BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11959 (UTR included)
(1909 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_435_C1 1927 0.0
>BF14_435_C1
Length = 1901
Score = 1927 bits (972), Expect = 0.0
Identities = 981/984 (99%)
Strand = Plus / Plus
Query: 462 atcggtagatcatcagagtctccgatagacttcgtggtgatggacacagtagctggtgac 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atcggtagatcatcagagtctccgatagacttcgtggtgatggacacagtagctggtgac 627
Query: 522 aagactggtgataccaaagtgttacagagcaccatctcgcgtttcgcctgccgcatactg 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aagactggtgataccaaagtgttacagagcaccatctcgcgtttcgcctgccgcatactg 687
Query: 582 tccgatagaaatgacgtcaacaactgccgcatatacgccgctggcttcgattcttctagg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tccgatagaaatgacgtcaacaactgccgcatatacgccgctggcttcgattcttctagg 747
Query: 642 aatatatttcttggtgagaaggccactaaatggacggagaatcacgagatagacggtctg 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aatatatttcttggtgagaaggccactaaatggacggagaatcacgagatagacggtctg 807
Query: 702 actaccaacggcgtcctaatcatgcaccctcgtggtgacttctgcggaggcagcgccacc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 actaccaacggcgtcctaatcatgcaccctcgtggtgacttctgcggaggcagcgccacc 867
Query: 762 tgtggcccgtggcgcgaaacctccgtcggtggagctgtgttctcgctgagagagagccgc 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tgtggcccgtggcgcgaaacctccgtcggtggagctgtgttctcgctgagagagagccgc 927
Query: 822 tccgctcaacagaagggtttgccgtgtcaggctgagacgaacgttctcagagatgggacc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 tccgctcaacagaagggtttgccgtgtcaggctgagacgaacgttctcagagatgggacc 987
Query: 882 atgatcgacctgtgtggagcaacgctgctgtggaggagtgctgagggtttaaagaattca 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 atgatcgacctgtgtggagcaacgctgctgtggaggagtgctgagggtttaaagaattca 1047
Query: 942 cccacaaagcgtgaccttgaagcgctagtagacgagctgaacgccggccgcccgcagtgt 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 cccacaaagcgtgaccttgaagcgctagtagacgagctgaacgccggccgcccgcagtgt 1107
Query: 1002 cccgtaggtctcaacacgctggtcataccgcgcaagctctcctcagcgcaccaggactta 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 cccgtaggtctcaacacgctggtcataccgcgcaagctctcctcagcgcaccaggactta 1167
Query: 1062 aaccagccttacgtgtatctcaactgtggacatgttcaaggtgaacattcatggggcgcg 1121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 aaccagccttacgtgtacctcaactgtggacatgttcaaggtgaacattcatggggcgcg 1227
Query: 1122 gaaggcagtgagacgggcgtccggcgttgtcccatgtgtctaacggcagggcctgtggtt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 gaaggcagtgagacgggcgtccggcgttgtcccatgtgtctaacggcagggcctgtggtt 1287
Query: 1182 cgcgtctgtatgggaatagaaccagccttttacgtagactccggacctcccacgtacgcc 1241
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1288 cgcgtctgtatgggaatagaaccagccttctacgtagactccggacctcccacgtacgcc 1347
Query: 1242 ttcaacccctgcggacacatggcttcagagagaacagtcaaatactgggcaacagtggac 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ttcaacccctgcggacacatggcttcagagagaacagtcaaatactgggcaacagtggac 1407
Query: 1302 atcccccacggtacgaacggcttccacgccatctgtccgttctgcgcggctcccctgcag 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 atcccccacggtacgaacggcttccacgccatctgtccgttctgcgcggctcccctgcag 1467
Query: 1362 ggctcgccgggctacgtgcggctcatctttcaggataacctcgactgaatctcgtcatca 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 ggctcgccgggctacgtgcggctcatctttcaggataacctcgactgaatctcgtcatca 1527
Query: 1422 ccgcctctatccttatatatgcag 1445
||||| ||||||||||||||||||
Sbjct: 1528 ccgccactatccttatatatgcag 1551
Score = 280 bits (141), Expect = 8e-75
Identities = 147/149 (98%)
Strand = Plus / Plus
Query: 1761 cagattattcctcgaccgtatatatgttggcgacgcagaggaccatgttagcgcgttcat 1820
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1549 cagattattcctcgaccgtatatacgttggcgacgcagaggaccatgttagcgcgttcat 1608
Query: 1821 gttcacttatgttcagcctgcttcgactcggacgcgaatggttcatacaattaatgcacc 1880
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 attcacttatgttcagcctgcttcgactcggacgcgaatggttcatacaattaatgcacc 1668
Query: 1881 gaaattataaaaatacagtttataaaata 1909
|||||||||||||||||||||||||||||
Sbjct: 1669 gaaattataaaaatacagtttataaaata 1697
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 256,543
Number of extensions: 6200
Number of successful extensions: 6200
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6200
Number of HSP's successfully gapped: 2
Length of query: 1909
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1892
Effective length of database: 8,119,229
Effective search space: 15361581268
Effective search space used: 15361581268
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)