BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11960 (UTR included)
(2485 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2H03 1382 0.0
>BF01051B2H03
Length = 785
Score = 1382 bits (697), Expect = 0.0
Identities = 724/733 (98%)
Strand = Plus / Plus
Query: 764 tttaaaaacaagattcaggccacagaaacgagaaaatgatggagattctggtagagatga 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tttaaaaacaagattcaggccacagaaacgagaaaatgatggagattctggtagagatga 112
Query: 824 tagaaagaaaaaacgcaaagaaaaagatcattcagaaaacaagtcatcaaagagaccaaa 883
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 113 tagaaagaaaaaacgcaaagaaaaagatcattcagaaaacaaatcatcaaagagaccaaa 172
Query: 884 taaagatggttgtggagattgtggtggctgttcacaaacacacgactgtggccactgtga 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 taaagatggttgtggagattgtggtggctgttcacaaacacacgactgtggccactgtga 232
Query: 944 cgcatgcgaggatatgtacaagtatggaggtaataacaagttaaagttgacctgccgtca 1003
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 233 cgcatgcgaggatatgtacaagtatggaggtaataacaagttaaagttgtcctgccgtca 292
Query: 1004 aagattgtgcgttaaaagcaaaaagacctctagaatatcaagtagtaaccgcataaagaa 1063
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 293 aagattgtgcgttaaaagcaaaaagacctctagaatatcaagtagtaaccgcattaagaa 352
Query: 1064 gaagcatgaacgtgaggtttatgaacccgaagagtcaatatcccaccttcagacatcaga 1123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaagcatgaacgtgaggtttacgaacccgaagagtcaatatcccaccttcagacatcaga 412
Query: 1124 gcctcggcaatgctatggaccgcaatgctgtaaggcagctcagtatggctccaaatactg 1183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 413 gcctcggcaatgctatggaccgcaatgctgtaaggcagctcagtatggatccaaatactg 472
Query: 1184 ttcccagcagtgcggaatgagacttgctaccgctaggatttatcaggtgttgccgcagcg 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttcccagcagtgcggaatgagacttgctaccgctaggatttatcaggtgttgccgcagcg 532
Query: 1244 cattcaggagtggtcgctctccagctgtgtggcggagcagcataaccgtcgttcattgga 1303
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 533 tattcaggagtggtcgctctccagctgtgtggcggagcagcataaccgccgttcattgga 592
Query: 1304 ggtggtcaggtcggggctggctaaagcgcaggcagcgctgagggcgttagacaaacagca 1363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 593 ggtggtcaggtcggggctggctaaagcgcaggcagcgctgagggcgttggacaaacagca 652
Query: 1364 cgctgagatagacgagatgctgcagcgagctaagcatgccaccatagaacacactgatga 1423
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 653 cgctgagatagacgagatgctgcagcgagctaagcatgccaccatagaacacaccgatga 712
Query: 1424 gaaggaagcagacgacgagacctcaatgtactgcatcacgtgcggccacgagatacactc 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gaaggaagcagacgacgagacctcaatgtactgcatcacgtgcggccacgagatacactc 772
Query: 1484 gcgctcagctgtc 1496
|||||||||||||
Sbjct: 773 gcgctcagctgtc 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 314,358
Number of extensions: 7399
Number of successful extensions: 7399
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7399
Number of HSP's successfully gapped: 1
Length of query: 2485
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2468
Effective length of database: 8,119,229
Effective search space: 20038257172
Effective search space used: 20038257172
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)