BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11966 (UTR included)
(3775 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1936_C1 1629 0.0
>BF14_1936_C1
Length = 1136
Score = 1629 bits (822), Expect = 0.0
Identities = 831/834 (99%)
Strand = Plus / Plus
Query: 2942 cgattatgaaaacgaatcgagtatgccaattgagccgtacatacataaagatgtacatgt 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgattatgaaaacgaatcgagtatgccaattgagccgtacatacataaagatgtacatgt 60
Query: 3002 caatcctaaaatgaccccagtggatacaaggcggcccaggtcagtagattaccccgccaa 3061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caatcctaaaatgaccccagtggatacaaggcggcccaggtcagtagattaccccgccaa 120
Query: 3062 ggccagtacctcgccgtcgtccagggattcgaataggaactatgaaagttctccactggt 3121
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 gtccagtacctcgccgtcgtccagggattcgaataggaactatgaaagttcaccactggt 180
Query: 3122 tgctagcatcaatggagtcgaatatcatcccaccaccgaggatctgatgctgtccatgtt 3181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgctagcatcaatggagtcgaatatcatcccaccaccgaggatctgatgctgtccatgtt 240
Query: 3182 ccaggagtcgaaatacatagtgccgagacatatgacaggggaatcccacaggacaggtga 3241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccaggagtcgaaatacatagtgccgagacatatgacaggggaatcccacaggacaggtga 300
Query: 3242 gaaatctgtttggaaaactcgaatatccacgtgagagcagctgttgaaattcatatactc 3301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaatctgtttggaaaactcgaatatccacgtgagagcagctgttgaaattcatatactc 360
Query: 3302 tttatcctatatttattttacttgtacctttagatctgatgatgccgattaggacatttt 3361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttatcctatatttattttacttgtacctttagatctgatgatgccgattaggacatttt 420
Query: 3362 taactaacggtttctgaacgtttgtgtatcagaatgacatgagcttcctaaacgaattat 3421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taactaacggtttctgaacgtttgtgtatcagaatgacatgagcttcctaaacgaattat 480
Query: 3422 atttcatttgacgtatgacgatatgtcaatttgaaaaaatgtctagtttcagttgtgtgc 3481
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 atttcatttgacgtatgacgatatgtcaattttaaaaaatgtctagtttcagttgtgtgc 540
Query: 3482 tagtttgtttttaagggtagctctgtatttatcgaatttggttaacttgaagctagtgta 3541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tagtttgtttttaagggtagctctgtatttatcgaatttggttaacttgaagctagtgta 600
Query: 3542 gtgcaagtgtatgtagcgtgttagtgacttagttacggagtaaaggatttgtcattgtaa 3601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgcaagtgtatgtagcgtgttagtgacttagttacggagtaaaggatttgtcattgtaa 660
Query: 3602 taccacacttgtgccttggctatagggtgttaatttgtgattgaaaaattatacgatacg 3661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taccacacttgtgccttggctatagggtgttaatttgtgattgaaaaattatacgatacg 720
Query: 3662 attatccgctaggaatttgattgtgagatatttgtattaaatgcaattgtataatgtata 3721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attatccgctaggaatttgattgtgagatatttgtattaaatgcaattgtataatgtata 780
Query: 3722 gatgttatgtctcgtttcatataatcttgtacttgattcggtagttttgtatta 3775
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gatgttatgtctcgtttcatataatcttgtacttgattcggtagttttgtatta 834
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 375,067
Number of extensions: 6553
Number of successful extensions: 6553
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6553
Number of HSP's successfully gapped: 1
Length of query: 3775
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3757
Effective length of database: 8,109,745
Effective search space: 30468311965
Effective search space used: 30468311965
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)