BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11970 (UTR included)
(2422 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3104_C1 1612 0.0
>BF14_3104_C1
Length = 1004
Score = 1612 bits (813), Expect = 0.0
Identities = 819/821 (99%)
Strand = Plus / Plus
Query: 493 gcgtgacaatgagagaaaaacgcggaggtgccatgagcaaaatgcagaagctcagaaaaa 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gcgtgacaatgagagaaaaacgcggaggtgccatgagcaaaatgcagaagctcagaaaaa 243
Query: 553 gattgtccctgagctttggtagattgtcaacgaaagacgaatcagaagttgacatcgagt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gattgtccctgagctttggtagattgtcaacgaaagacgaatcagaagttgacatcgagt 303
Query: 613 gccgtggaaggcagaacggcggcggtggcgctcgcggtaaactgccgtacaacggttact 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gccgtggaaggcagaacggcggcggtggcgctcgcggtaaactgccgtacaacggttact 363
Query: 673 cagaagagtgtctagatagactcgaacccaatggaaatataccaaacgataaggactccc 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagaagagtgtctagatagactcgaacccaatggaaatataccaaacgataaggactccc 423
Query: 733 attatgattggagcggcggtggtaatggtgagtatcgtgttcggagacagctctctgtgt 792
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 424 attatgattggagcggcggtggtaacggtgagtatcgtgttcggagacagctctctgtgt 483
Query: 793 catctgactccaagctgttagacgagggagcccgggaggacgcgagggtagtcatgaggc 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 catctgactccaagctgttagacgagggagcccgggaggacgcgagggtagtcatgaggc 543
Query: 853 ctaagcgaccgccgaggcctaagtccgaggctttcttaggaccacaagagaattccaatc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ctaagcgaccgccgaggcctaagtccgaggctttcttaggaccacaagagaattccaatc 603
Query: 913 gacgtaccaagcggtttagtgccttcgggggtgactctccttttgggaagtctgaggcgt 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gacgtaccaagcggtttagtgccttcgggggtgactctccttttgggaagtctgaggcgt 663
Query: 973 atataaaattggagcaactcggtgaggggtcttatgctacagtctataaaggatatagca 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 atataaaattggagcaactcggtgaggggtcttatgctacagtctataaaggatatagca 723
Query: 1033 atttaacacaacaagttgtggccttgaaagagatcaggcttcaggaagaggaaggcgctc 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 atttaacacaacaagttgtggccttgaaagagatcaggcttcaggaagaggaaggcgctc 783
Query: 1093 ctttcacagcgataagagaagcttccttactcaaagagttgaaacacgccaacatagtca 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 ctttcacagcgataagagaagcttccttactcaaagagttgaaacacgccaacatagtca 843
Query: 1153 cgttacacgacattgtgcacaccagggagacattaacgtttgtgttcgaatttgtggaca 1212
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cgttacacgacattgtacacaccagggagacattaacgtttgtgttcgaatttgtggaca 903
Query: 1213 cagatctatctcagtacatggagcgacatcccggtggacttaacaggcacaatgtgagat 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cagatctatctcagtacatggagcgacatcccggtggacttaacaggcacaatgtgagat 963
Query: 1273 tatttatgtatcaattgttgagaggactcgcgtactgccat 1313
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tatttatgtatcaattgttgagaggactcgcgtactgccat 1004
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,037
Number of extensions: 19952
Number of successful extensions: 19952
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19952
Number of HSP's successfully gapped: 1
Length of query: 2422
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2405
Effective length of database: 8,119,229
Effective search space: 19526745745
Effective search space used: 19526745745
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)