BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11979 (UTR included)
(3007 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_609_C1 1919 0.0
>BF14_609_C1
Length = 981
Score = 1919 bits (968), Expect = 0.0
Identities = 977/980 (99%)
Strand = Plus / Plus
Query: 371 atagaaaatagaatattcggatcaggaaacgttattattattaaaaatatatatatatat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atagaaaatagaatattcggatcaggaaacgttattattattaaaaatatatatatatat 61
Query: 431 attgtattgtatatgtattggaagattgccaatatatcagaaagttataaaacccatatt 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attgtattgtatatgtattggaagattgccaatatatcagaaagttataaaacccatatt 121
Query: 491 atacaacaaaatgagtaaaaagcccatttcattcggaaaaattagttttgccatcaacac 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atacaacaaaatgagtaaaaagcccatttcattcggaaaaattagttttgccatcaacac 181
Query: 551 attgggacagaataatgtcgagaaggatagcaattcaggctttggcacgttcggtcgcac 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 attgggacagaataatgtcgagaaggatagcaattcaggctttggcacgttcggtcgcac 241
Query: 611 gccgattatggaacaaaaggatatcgaggatatttccgaagacctagagagccaaaactt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gccgattatggaacaaaaggatatcgaggatatttccgaagacctagagagccaaaactt 301
Query: 671 gcatcaagtaatgggtattaaaaattttggtaaaaaagcaaaatgctataatattgatga 730
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 302 gcatcaagtaatgggtattaaaaattttggtaaaaaagcaaaaagctataatattgatga 361
Query: 731 aatggtagaacaggcgcgtttaaccgctcaagaaaacaaaaaaaaagtagaagccgaaaa 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatggtagaacaggcgcgtttaaccgctcaagaaaacaaaaaaaaagtagaagccgaaaa 421
Query: 791 tgcaaataaagaaaaggatatgcaaggtactaaacttttagggccagttaatgtgtctac 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgcaaataaagaaaaggatatgcaaggtactaaacttttagggccagttaatgtgtctac 481
Query: 851 aagtaatgatgatcaagatgaagaggatgatgaacctatcggtcctcccataccagcgaa 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagtaatgatgatcaagatgaagaggatgatgaacctatcggtcctcccataccagcgaa 541
Query: 911 tctgttaccaactttacacaccaaagaacacaaaaacaatgaaacaaaaaactctgataa 970
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 542 tctgttaccaactttacacaccaaagaatacaaaaacaatgaaacaaaaaactctgataa 601
Query: 971 cagtgatgagaagaatcaacaaagtgaagacagctatgacgatctcagcggctcggatga 1030
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 602 cagtgatgagaagaatcaacaaagtgaagacagctatgacgatctcagtggctcggatga 661
Query: 1031 cgaagagttatcaatagagaaaaggataccaaatacacatgaggtagaaatgcaacatgg 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cgaagagttatcaatagagaaaaggataccaaatacacatgaggtagaaatgcaacatgg 721
Query: 1091 aagcaaggcagtagtagccgtagcggtggacccctcaggagctcgactggctactggctc 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aagcaaggcagtagtagccgtagcggtggacccctcaggagctcgactggctactggctc 781
Query: 1151 agttgattacgaagtttcattttgggattttgctggtatggacacgtcgatgcgttcgtt 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 agttgattacgaagtttcattttgggattttgctggtatggacacgtcgatgcgttcgtt 841
Query: 1211 ccgcacgctccagccgtgtgagaaccatcccatcaaggccctgcagtactccgccaccgg 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ccgcacgctccagccgtgtgagaaccatcccatcaaggccctgcagtactccgccaccgg 901
Query: 1271 ggactccatactagtggtgagcggctccgctcaggccaaggtgctggaccgggacgggtt 1330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ggactccatactagtggtgagcggctccgctcaggccaaggtgctggaccgggacgggtt 961
Query: 1331 cgaggtcctggagtgtgtga 1350
||||||||||||||||||||
Sbjct: 962 cgaggtcctggagtgtgtga 981
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 343,675
Number of extensions: 12853
Number of successful extensions: 12853
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12847
Number of HSP's successfully gapped: 1
Length of query: 3007
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2989
Effective length of database: 8,109,745
Effective search space: 24240027805
Effective search space used: 24240027805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)