BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11981 (UTR included)
(1780 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2575_C1 1162 0.0
>BF14_2575_C1
Length = 840
Score = 1162 bits (586), Expect = 0.0
Identities = 586/586 (100%)
Strand = Plus / Plus
Query: 840 gttaccatgacgacgggtctggaccgggacacgatacgggccgcctacgaggacgtgcgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gttaccatgacgacgggtctggaccgggacacgatacgggccgcctacgaggacgtgcgc 314
Query: 900 tcggactcctcgcccactgagtgggcggtgttcaagttcgagggcacgcggatcgtgtgt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcggactcctcgcccactgagtgggcggtgttcaagttcgagggcacgcggatcgtgtgt 374
Query: 960 gcggcgcgcggcggagacttctcagagttccgcacgcacttcgccgacgacgagagagcg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcggcgcgcggcggagacttctcagagttccgcacgcacttcgccgacgacgagagagcg 434
Query: 1020 ttcggatacctcaggatgcagatgggggacgagatgtcgaagaggaagaagttcatgttg 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttcggatacctcaggatgcagatgggggacgagatgtcgaagaggaagaagttcatgttg 494
Query: 1080 atgacgtgggtgggacccaacgtgtccgtcatcaaccgcgccaaaatgtccaccgacaag 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgacgtgggtgggacccaacgtgtccgtcatcaaccgcgccaaaatgtccaccgacaag 554
Query: 1140 gccatcatcaaggatatcatttccaatttcgccgtcgaacttcagttagagagtcaatca 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gccatcatcaaggatatcatttccaatttcgccgtcgaacttcagttagagagtcaatca 614
Query: 1200 gaaatagacatcgaccaattcaaagaagctctcaatagagcgggcggtgccaactacggt 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gaaatagacatcgaccaattcaaagaagctctcaatagagcgggcggtgccaactacggt 674
Query: 1260 actggaatccgggatttatgaatcataaaatagacatcgcgtgcatcttgctacaaatat 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 actggaatccgggatttatgaatcataaaatagacatcgcgtgcatcttgctacaaatat 734
Query: 1320 ctacaatatcgacttagcaatactttcctaccaaaaacttatttgactcgaaccacgtgc 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ctacaatatcgacttagcaatactttcctaccaaaaacttatttgactcgaaccacgtgc 794
Query: 1380 tcgtctatagtaacaaactttttatattttaacaaagtattgctac 1425
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcgtctatagtaacaaactttttatattttaacaaagtattgctac 840
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,073
Number of extensions: 4324
Number of successful extensions: 4324
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4322
Number of HSP's successfully gapped: 1
Length of query: 1780
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1763
Effective length of database: 8,119,229
Effective search space: 14314200727
Effective search space used: 14314200727
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)