BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11990 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01003X1D02 1421 0.0
>BF01003X1D02
Length = 746
Score = 1421 bits (717), Expect = 0.0
Identities = 726/729 (99%)
Strand = Plus / Plus
Query: 259 ccattagcaaaacaatctttggagattaaaaataatgaagcagtattttctctgatatta 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ccattagcaaaacaatctttggagattaaaaataatgaagcagtattttctctgatatta 71
Query: 319 ttttaatactaggtcccaacgttacaaaaataagaatgtgtgataatttgaaaatactaa 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ttttaatactaggtcccaacgttacaaaaataagaatgtgtgataatttgaaaatactaa 131
Query: 379 aacaaggagcggaagcgaagctatatatatgtaactatttaggaaaaccaactctcataa 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aacaaggagcggaagcgaagctatatatatgtaactatttaggaaaaccaactctcataa 191
Query: 439 aagagaggttcagaaagcactacaggcaccctgatcttgatacgtctattactaaagaaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aagagaggttcagaaagcactacaggcaccctgatcttgatacgtctattactaaagaaa 251
Query: 499 gaatgaaaaacgaagctcgatctatagtacggtgtaagagcgcgggaattaaaacaccgt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaatgaaaaacgaagctcgatctatagtacggtgtaagagcgcgggaattaaaacaccgt 311
Query: 559 cattgtatctagcggacttcgatcggcgacgtatttacatgcaacattttgaaagaagca 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cattgtatctagcggacttcgatcggcgacgtatttacatgcaacattttgaaagaagca 371
Query: 619 tcacagtcaaagactttttaatatattacaagaaagtggacaactccaggggagatcatg 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcacagtcaaagactttttaatatattacaagaaagtggacaactccaggggagatcatg 431
Query: 679 acagtttaggttcattgcttaaaagtattggagaaactgttagaaaattacatgacaaca 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acagtttaggttcattgcttaaaagtattggagaaactgttagaaaattacatgacaaca 491
Query: 739 atataatacatggagatttgaccacatcaaatatgttgctgacggagaaggagcccagtg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atataatacatggagatttgaccacatcaaatatgttgctgacggagaaggagcccagtg 551
Query: 799 acatagaagatgatacaaaatggttgaatgacaaaaatgttgaacttgtattgattgatt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 552 acatagaagatgatacaaaatggttgaatgacaaaaatgttgaacttgtattgatcgatt 611
Query: 859 ttggactgtcctttatagacagcagtacggaagacaaaggagtggatctgtatgtactgg 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ttggactgtcctttatagacagcagtacggaagacaaaggagtggatctgtatgtactgg 671
Query: 919 aacgagctctgattagcacccacaatgactatcaagatctgtttgaaaaaattttttatg 978
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 672 aacgagctctgattagcacccacaatgactatcaagatctatttgaaaaaattttttatg 731
Query: 979 tgtacaagt 987
||||||||
Sbjct: 732 cgtacaagt 740
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 216,942
Number of extensions: 4840
Number of successful extensions: 4840
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4840
Number of HSP's successfully gapped: 1
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)