BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11995 (UTR included)
(1723 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B1F01 1586 0.0
>BF01033B1F01
Length = 804
Score = 1586 bits (800), Expect = 0.0
Identities = 803/804 (99%)
Strand = Plus / Plus
Query: 97 aacagctgttctacaatattccgtcgggcaactcaggtagcagctgtgtacgaatgaaca 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacagctgttctacaatattccgtcgggcaactcaggtagcagctgtgtacgaatgaaca 60
Query: 157 cgcagccgttttccttggaactgcgattgtttggacattgaatagtggctttctcattgt 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcagccgttttccttggaactgcgattgtttggacattgaatagtggctttctcattgt 120
Query: 217 tttatctcctttgtgttaatcaacaaatccggaatttcgatttcaacgaatcaaacatct 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatctcctttgtgttaatcaacaaatccggaatttcgatttcaacgaatcaaacatct 180
Query: 277 tctgttagtgctggcgttaggcagacgcgttacgtttcatccatgatcaggagatattat 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgttagtgctggcgttaggcagacgcgttacgtttcatccatgatcaggagatattat 240
Query: 337 gtttaccaaaattaattcgttgttattgtgattcgagactatttgaaatgcctcgtgaat 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttaccaaaattaattcgttgttattgtgattcgagactatttgaaatgcctcgtgaat 300
Query: 397 acgtggatcgcgaggagagttccatagtgttatgtcaatagaatatctacgtgtagatag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgtggatcgcgaggagagttccatagtgttatgtcaatagaatatctacgtgtagatag 360
Query: 457 cagttttaattatctcagtgttgttagattaatacttaataattatgtctagtacggtac 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagttttaattatctcagtgttgttagattaatacttaataattatgtctagtacggtac 420
Query: 517 cgacgagttctgcattgagggctttggccttagaatataagagcctacaagaagaacccg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgacgagttctgcattgagggctttggccttagaatataagagcctacaagaagaacccg 480
Query: 577 tggaagggtttagagtgaaattattgggtgaggacaatttatttgaatgggaggttgcaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggaagggtttagagtgaaattattgggtgaggacaatttatttgaatgggaggttgcaa 540
Query: 637 ttttcgggccaccagacacgctttaccaaggaggatatttcaaggctcatatgaaatttc 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttttcgggccaccagacacgctttaccaaggaggatatttcaaggctcatatgaaatttc 600
Query: 697 caccggactatccatattctccaccatctataaagttcctgactaaagtttggcatccga 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caccggactatccatattctccaccatctataaagttcctgactaaagtttggcatccga 660
Query: 757 atgtttatgagaacggcgatctctgcatatcaattctgcatccccccgtggacgacccac 816
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 atgtttatgagaacggcgatctctgcatatcaattcttcatccccccgtggacgacccac 720
Query: 817 agtctggtgagctgccctgcgagcgttggaaccccacccagtccgtgcgcacggtgctgt 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agtctggtgagctgccctgcgagcgttggaaccccacccagtccgtgcgcacggtgctgt 780
Query: 877 tgtccgtgatctcgctattgaacg 900
||||||||||||||||||||||||
Sbjct: 781 tgtccgtgatctcgctattgaacg 804
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,685
Number of extensions: 2830
Number of successful extensions: 2830
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2830
Number of HSP's successfully gapped: 1
Length of query: 1723
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1706
Effective length of database: 8,119,229
Effective search space: 13851404674
Effective search space used: 13851404674
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)