BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11997 (UTR included)
(2314 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B2B03 1334 0.0
BF14_2380_C1 70 2e-11
>BF01032B2B03
Length = 710
Score = 1334 bits (673), Expect = 0.0
Identities = 700/710 (98%)
Strand = Plus / Plus
Query: 817 aattctttttagttatacctgtttgctatgatttagactgcatcaacagcacaattctaa 876
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 aattctttttagttatacctgtttgctatgatttagactgcatcaacagtacaattctaa 60
Query: 877 tttatgacaatgaacagtggcatgaccttcaagtagattttaatgatggaaagggcactt 936
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tttatgacaatgaacagtggcatgatcttcaagtagattttaatgatggaaagggcactc 120
Query: 937 tgtggagatttgtacctcctagaaatgagacctatctggacactattactatgcgcagtg 996
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tgtggagatttgtacctcctagaaatgagacctacctggacactattactatgcgcagtg 180
Query: 997 gagactataatatggatggatatcctgatattttaatgactttaagtcctgttaatggta 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagactataatatggatggatatcctgatattttaatgactttaagtcctgttaatggta 240
Query: 1057 aagacactaaagccttccttttgcacaatgtggtatgtaataaagagggctgcaaatttc 1116
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 aagacactaaagccttccttttgcacaatgtggtgtgtaataaagagggctgcaaatttc 300
Query: 1117 atagaacttttgaggttcaatgggagagatttagtacatttgggaacaatgtagtaatgg 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagaacttttgaggttcaatgggagagatttagtacatttgggaacaatgtagtaatgg 360
Query: 1177 cgacattttatgatttttatatggatggtgtccttgatgttatttatgtccaaagaaata 1236
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctacattttatgatttttatatggatggtgtccttgatgttatttatgtccaaagaaata 420
Query: 1237 ttacaacagggaagcattttttaagagcttttagaaatgagttagaatatgatacaaatt 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttacaacagggaagcattttttaagagcttttagaaatgagttagaatatgatacaaatt 480
Query: 1297 ttattaaagtaatagttgtaacaggtcttagtaataagaaaatacctacaattaatggaa 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttattaaagtaatagttgtaacaggtcttagtaataagaaaatacctacaattaatggaa 540
Query: 1357 ctttgatcactagaaaggtgacttttggaacaaatttaccagggcctaagattggataca 1416
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctttgataactagaaaggtgacttttggaacaaatttaccagggcctaagattggataca 600
Query: 1417 atacttggtcacaagaaggcaattatcggactggtgtatgtgcgcagctaccacaatctg 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atacttggtcacaagaaggcaattatcggactggtgtatgtgcgcagctaccacaatctg 660
Query: 1477 cgtattatgctttacaactaccatattctatttttggtcttgatcggact 1526
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 661 cgtattatgctttannnctaccatattctatttttggtcttgatcggact 710
>BF14_2380_C1
Length = 872
Score = 69.9 bits (35), Expect = 2e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 2254 tcttttctttcttcttttctagtttttccaatttt 2288
|||||||||||||||||||||||||||||||||||
Sbjct: 872 tcttttctttcttcttttctagtttttccaatttt 838
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,490
Number of extensions: 7066
Number of successful extensions: 7066
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7066
Number of HSP's successfully gapped: 2
Length of query: 2314
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2297
Effective length of database: 8,119,229
Effective search space: 18649869013
Effective search space used: 18649869013
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)