BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11998 (UTR included)
(4882 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3095_C1 2625 0.0
BF01040B1H02 1102 0.0
>BF14_3095_C1
Length = 1360
Score = 2625 bits (1324), Expect = 0.0
Identities = 1342/1348 (99%)
Strand = Plus / Plus
Query: 2739 gcgacgtcactagaacctaaagatatagtggagcgtgtgaagcgcggccgtcgcggctgt 2798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcgacgtcactagaacctaaagatatagtggagcgtgtgaagcgcggccgtcgcggctgt 72
Query: 2799 gaggagtccttccggcccgacacacgtgctctggacgtggaagagtacgtgataagttgt 2858
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 73 gaggagtccttccggcccgacacacgtgctctggacgtggaggagtacgtgataagttgt 132
Query: 2859 atgagggattgctgggccgaggatcccgtactacgaccagatttcccagcagttcgcgcc 2918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atgagggattgctgggccgaggatcccgtactacgaccagatttcccagcagttcgcgcc 192
Query: 2919 aggctcaagaggatgaagtccggcaagtccaggaacataatggatcaaatgatggatatg 2978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggctcaagaggatgaagtccggcaagtccaggaacataatggatcaaatgatggatatg 252
Query: 2979 atggagaagtacgcgaataatttggaagaactagtcaatgaaaggaccaggctactgttt 3038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atggagaagtacgcgaataatttggaagaactagtcaatgaaaggaccaggctactgttt 312
Query: 3039 gaggagaagcagaagacagaagacttgctgcacaggatgttgccagagtcggtcgcacac 3098
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaggagaagcagaagactgaagacttgctgcacaggatgttgccagagtcggtcgcacac 372
Query: 3099 cggctgactacaggcgagggtgtggagccggagtcgtttgactccgtgaccatatacttc 3158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cggctgactacaggcgagggtgtggagccggagtcgtttgactccgtgaccatatacttc 432
Query: 3159 agcgacatagtcggcttcacggccatgtccgcagagagcactccgctacaggtcgtcaac 3218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agcgacatagtcggcttcacggccatgtccgcagagagcactccgctacaggtcgtcaac 492
Query: 3219 ttcctcaacgatctctacacagtgtttgacaggatcataagaggctacgacgtctataaa 3278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttcctcaacgatctctacacagtgtttgacaggatcataagaggctacgacgtctataaa 552
Query: 3279 gtggaaactataggggacgcttacatggtggtatctggtcttccaataagaaacaacgac 3338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtggaaactataggggacgcttacatggtggtatctggtcttccaataagaaacaacgac 612
Query: 3339 agacacgtcggtgaaatagcatcgatggcgttggagctccttaacgccgtgaagactcac 3398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agacacgtcggtgaaatagcatcgatggcgttggagctccttaacgccgtgaagactcac 672
Query: 3399 aaaatatcacacagaccgaacgaaattttgaaattaagaataggaatacacacaggtgcg 3458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 aaaatatcacacagaccgaacgaaattttgaaattaagaataggaatacacacaggtgcg 732
Query: 3459 gtggttgccggcgtggtgggcctgaccatgcctcgctactgtttgttcggcgacacagtg 3518
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gtggtggccggcgtggtgggcctgaccatgcctcgctactgtttgttcggcgacacagtg 792
Query: 3519 aacacggcctcccgtatggagtccaacggggagcctctccgtatacacatctcccccagc 3578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aacacggcctcccgtatggagtccaacggggagcctctccgtatacacatctcccccagc 852
Query: 3579 tgtaagatagctctggacaaactgggcgggtacatcgtggagccacgaggaactatacct 3638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tgtaagatagctctggacaaactgggcgggtacatcgtggagccacgaggaactatacct 912
Query: 3639 attaagggcaaggggcagttgcaaacgttctggctggtgggcgcaaccgagaaagctatt 3698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 attaagggcaaggggcagttgcaaacgttctggctggtgggcgcaaccgagaaagctatt 972
Query: 3699 cagaagcggccggtggagggagaggagcgaccgctgttctgtcgaccgagacgaagtcca 3758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 cagaagcggccggtggagggagaggagcgaccgctgttctgtcgaccgagacgaagtcca 1032
Query: 3759 cgtttgactgattctagacatccttctatctctgagctgaagccgctcgtacgacgcgcc 3818
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 cgtctgactgattctagacatccttctatctctgagctgaagccgctcgtacgacgcgcc 1092
Query: 3819 gcgctcgccgctcacgccgccaacaccaagcgagcattgagttccatcgcgtcgtcgacg 3878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 gcgctcgccgctcacgccgccaacaccaagcgagcattgagttccatcgcgtcgtcgacg 1152
Query: 3879 gcatgtgagggagcgggcgccatgtgtccggagacgggtccgttgtcttgtggggcggcg 3938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 gcatgtgagggagcgggcgccatgtgtccggagacgggtccgttgtcttgtggggcggcg 1212
Query: 3939 gcgggggtcggggccgcgttgcgtcctgctcgctcgctggacgtacttccggctcgcgag 3998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 gcgggggtcggggccgcgttgcgtcctgctcgctcgctggacgtacttccggctcgcgag 1272
Query: 3999 cgtctgcgtcggcattacacgacccgctcgctcgacgtggacgtggccatcgccaccgtc 4058
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1273 cgtctgcgtcggcactacacgacccgctcgctcgacgtggacgtggccatcgccaccgtc 1332
Query: 4059 tcctcgtctctgtacaacggcgccgccc 4086
|||||||| |||||||||||||||||||
Sbjct: 1333 tcctcgtccctgtacaacggcgccgccc 1360
>BF01040B1H02
Length = 667
Score = 1102 bits (556), Expect = 0.0
Identities = 617/639 (96%)
Strand = Plus / Minus
Query: 3876 acggcatgtgagggagcgggcgccatgtgtccggagacgggtccgttgtcttgtggggcg 3935
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 667 acggcatgtgagggagcgggcgccatgtgtccagagacgggtccgtnnnnntgtggggcg 608
Query: 3936 gcggcgggggtcggggccgcgttgcgtcctgctcgctcgctggacgtacttccggctcgc 3995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcggcgggggtcggggccgcgttgcgtcctgctcgctcgctggacgtacttccggctcgc 548
Query: 3996 gagcgtctgcgtcggcattacacgacccgctcgctcgacgtggacgtggccatcgccacc 4055
|||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 547 gagcgtttgcgttggcactacacgacccgctcgcttgacgtggacgtggccatcgccacc 488
Query: 4056 gtctcctcgtctctgtacaacggcgccgccctcgttcctccggacgagccaccgcgtgct 4115
|| |||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 487 gtttccttgtccctgtacaacggcgccgccctcgttcctccggacgagccgccgcgtgct 428
Query: 4116 gacgaggacagcccgctgctgcgacaggcgagcctctgcaacaaactggaccgccccaag 4175
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 427 gacgaggacagcccgctgctgcgacaggcgagcctttgcaacaaactggaccgccccaag 368
Query: 4176 cgcaaggtgcccgactctgacttcatagagttctacaaaaagtggcgctcgctcgagaac 4235
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 367 cgcaaggtgcccgactttgacttcatagagttttacaaaaagtggcgctcgctcgagaac 308
Query: 4236 gtcgcggactcgaagggtgccaagatccctcgtttcgcgatccgctcgtggctgcgaggc 4295
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtcgcggactccaagggtgccaagatccctcgtttcgcgatccgctcgtggctgcgaggc 248
Query: 4296 atcttcggcggcgggggcggcgctcgcagtacgtcctcgtccttgcgtcgcgcgccccag 4355
|| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 247 atttttggcggcgggggcggcgctcgcagtacgtccttgtccttgcgtcgcgcgccccag 188
Query: 4356 ctggtcgaccgggagtccgccgtctagtgaccccccacccactatgtatattgcgttata 4415
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctggtcgaccgggagtccgccgtttagtgaccccccacccactatgtatattgcgttata 128
Query: 4416 tgtatatgatatgccgttgtaaataatacgtgtaagtaaaacgatgttaccgtcaattgt 4475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tgtatatgatatgccgttgtaaataatacgtgtaagtaaaacgatgttaccgtcaattgt 68
Query: 4476 gaaataagagtttaatgttattaaataatttctatcgaa 4514
|||||||||||||||||||||||||||||||||||||||
Sbjct: 67 gaaataagagtttaatgttattaaataatttctatcgaa 29
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 425,909
Number of extensions: 8157
Number of successful extensions: 8157
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8156
Number of HSP's successfully gapped: 2
Length of query: 4882
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4864
Effective length of database: 8,109,745
Effective search space: 39445799680
Effective search space used: 39445799680
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)