BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN11999 (UTR included)
(2583 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B1H02 652 0.0
BF14_3095_C1 168 3e-41
>BF01040B1H02
Length = 667
Score = 652 bits (329), Expect = 0.0
Identities = 350/357 (98%)
Strand = Plus / Plus
Query: 2227 ttcgatagaaattatttaataacattaaactcttatttcacaattgacggtaacatcgtt 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29 ttcgatagaaattatttaataacattaaactcttatttcacaattgacggtaacatcgtt 88
Query: 2287 ttacttacacgtattatttacaacggcatatcatatacatataacgcaatatacatagtg 2346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ttacttacacgtattatttacaacggcatatcatatacatataacgcaatatacatagtg 148
Query: 2347 ggtggggggtcactagacggcggactcccggtcgaccagctggggcgcgcgacgcaagga 2406
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ggtggggggtcactaaacggcggactcccggtcgaccagctggggcgcgcgacgcaagga 208
Query: 2407 cgaggacgtactgcgagcgccgcccccgccgccgaagatgcctcgcagccacgagcggat 2466
| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 209 caaggacgtactgcgagcgccgcccccgccgccaaaaatgcctcgcagccacgagcggat 268
Query: 2467 cgcgaaacgagggatcttggcacccttcgagtccgcgacgttctcgagcgagcgccactt 2526
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 269 cgcgaaacgagggatcttggcacccttggagtccgcgacgttctcgagcgagcgccactt 328
Query: 2527 tttgtagaactctatgaagtcagagtcgggcaccttgcgcttggggcggtccagttt 2583
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 329 tttgtaaaactctatgaagtcaaagtcgggcaccttgcgcttggggcggtccagttt 385
>BF14_3095_C1
Length = 1360
Score = 168 bits (85), Expect = 3e-41
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 1184 gactccgtgaccatatacttcagcgacatagtcggcttcacggccatgtccgcagagagc 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gactccgtgaccatatacttcagcgacatagtcggcttcacggccatgtccgcagagagc 471
Query: 1244 actccgctacaggtggtcgacttcctcaacgacctgtacac 1284
|||||||||||||| ||| ||||||||||||| || |||||
Sbjct: 472 actccgctacaggtcgtcaacttcctcaacgatctctacac 512
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 209,777
Number of extensions: 3444
Number of successful extensions: 3444
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3444
Number of HSP's successfully gapped: 2
Length of query: 2583
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2566
Effective length of database: 8,119,229
Effective search space: 20833941614
Effective search space used: 20833941614
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)