BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12003 (UTR included)
(2851 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1A08 1459 0.0
>BF01025B1A08
Length = 770
Score = 1459 bits (736), Expect = 0.0
Identities = 754/760 (99%)
Strand = Plus / Plus
Query: 1172 agaagcaatggaagaagatgaagaagcgggactagtcccatttttcgtttcagcaacgct 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 agaagcaatggaagaagatgaagaagcgggactagtcccatttttcgtttcagcaacgct 70
Query: 1232 agggacaacagggacgtgtgcatttgataatttgtccgaaattggaccggtagttcggaa 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 agggacaacagggacgtgtgcatttgataatttgtccgaaattggaccggtagttcggaa 130
Query: 1292 atttcctagcgtttggctgcatgtagacgctgcgtatgctggcagctcatttatctgccc 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atttcctagcgtttggctgcatgtagacgctgcgtatgctggcagctcatttatctgccc 190
Query: 1352 tgaacataaatatcatctggcaggaattgaatatgctgactcatttaatactaattcaaa 1411
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgaacataaatatcacctggcaggaattgaatatgctgactcatttaatactaattcaaa 250
Query: 1412 taaaatgatgctcaccaactttgattgttctttaatgtgggtcacaaacagatatctatt 1471
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 251 taaaatgatgctcaccaactttgattgttctttaatgtgggtcacaaaccgatatctatt 310
Query: 1472 gacatctgctttagtcgtcgatccgttgtatttacaacattgttatgacggtaccgcaat 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gacatctgctttagtcgtcgatccgttgtatttacaacattgttatgacggtaccgcaat 370
Query: 1532 cgattaccgccactggggaataccgctcagccgtcgcttcagatcactgaagttgtggtt 1591
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cgattatcgccactggggaataccgctcagccgtcgcttcagatcactgaagttgtggtt 430
Query: 1592 catgttgaggagttatggaatcagtggcctgcagaaatatatacgaagacattgcgaact 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 catgttgaggagttatggaatcagtggcctgcagaaatatatacgaagacattgcgaact 490
Query: 1652 cgctaagtatttcgaacaacttgttaaaaaggacaagagattcgaagtatgcaaccaagt 1711
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 491 cgctaagtatttcgaacaacttgttaaaaaagacaagagattcgaagtatgcaaccaagt 550
Query: 1712 taagttgggattagtatgctttcgattggtagggagtcgcgacgaaaatgaggaacaagt 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 taagttgggattagtatgctttcgattggtagggagtcgcgacgaaaatgaggaacaagt 610
Query: 1772 tgatgagttgaataagaaactgcttactaacatcaatgcttctggaaagctccacatggt 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgatgagttgaataagaaactgcttactaacatcaatgcttctggaaagctccacatggt 670
Query: 1832 gcccacttcttttcgtgatcgatacgtgattcgtttctgtgttgtgcaccaacacgctag 1891
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 671 gcccacttcttttcgtgatcgatacgtgatttgtttctgtgttgtgcaccaacacgctag 730
Query: 1892 ccgtgaagatattgaatatgcttgggataccataactgac 1931
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 731 ccgtgaagatatcgaatatgcttgggataccataactgac 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 286,354
Number of extensions: 5315
Number of successful extensions: 5315
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5314
Number of HSP's successfully gapped: 1
Length of query: 2851
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2834
Effective length of database: 8,119,229
Effective search space: 23009894986
Effective search space used: 23009894986
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)