BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12007 (UTR included)
(1900 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2201_C1 1635 0.0
BF01041A2E09 157 8e-38
>BF14_2201_C1
Length = 861
Score = 1635 bits (825), Expect = 0.0
Identities = 853/861 (99%), Gaps = 1/861 (0%)
Strand = Plus / Plus
Query: 503 ggctcaaagtaagttgaatgatatggcagggaaattcgccaaaggtggccctcccggtct 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctcaaagtaagttgaatgatatggcagggaaattcgccaaaggtggccctcccggtct 60
Query: 563 tggtattggattaaaagtagttgccgttgtcggtgcagccgcttacggcatttcacaatc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtattggattaaaagtagttgccgttgtcggtgcagccgcttacggcatttcacaatc 120
Query: 623 tttatttactgttgagggtggacaccgtgcgatcatgttcaacagaataggaggtgttca 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatttactgttgagggtggacaccgtgcgatcatgttcaacagaataggaggtgttca 180
Query: 683 acaggaggttatggctgagggaatgcatttccgtatcccttggttccaataccccatcat 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaggaggttatggctgagggaatgcatttccgtatcccttggttccaataccccatcat 240
Query: 743 ttacgatatcaggtcacgtcctcgcaagatttcttctcccactggttcaaaagacttgca 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacgatatcaggtcacgtcctcgcaagatttcttctcccactggttcaaaagacttgca 300
Query: 803 aatggttaacatttcactgagagtgctatcccgtcctgactccaaatacctttccactat 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatggttaacatttcactgagagtgctatcccgtcctgactccaaatacctttccactat 360
Query: 863 gtacagacaactgggtaccgattatgatgagaaggtgttgccttccatttgtaatgaagt 922
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 gtacagacaactgggtaccgattatgatgagaaggtgttgccttccatttgtaacgaagt 420
Query: 923 tttaaaatctgttgttgctaaattcaatgcttcccagcttataacccaaagacaacaagt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttaaaatctgttgttgctaaattcaatgcttcccagcttataacccaaagacaacaagt 480
Query: 983 atctctgttgattagaagagaattggtcgagagagctgctgattttaacattattttgga 1042
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 481 atctctattgattagaagagaattggttgagagagctgctgattttaacattattttgga 540
Query: 1043 tgatgtatcactcactgaattaagttttggtaaagaatatacagctgctgtagaagctaa 1102
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 tgatgtatcactcactgaattaagtttcggtaaagaatatacagctgctgtagaagctaa 600
Query: 1103 acaggttgctcaacaagaagctcaacgtgctgcttttgtagttgaaagggccaagcaaga 1162
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaagttgctcaacaagaagctcaacgtgctgcttttgtagttgaaagggccaagcaaga 660
Query: 1163 gcgtcaacagaagattgtgcaagcagaaggagaggctgaggctgcagagatgttgggtaa 1222
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661 gcgtcaacagaagattgtgcaagcagaaggagaggccgaggctgcagagatgttgggtaa 720
Query: 1223 agccatgggaatgaaccccggttacctaaagctgcgt-aagatcagggccgcacaaagca 1281
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 721 agccatgggaatgaaccccggttacctaaagctgcgtaaagatcagggccgcacaaagca 780
Query: 1282 tatctcgtatgattgctcagtctcagaaccgagtgttcctgcccggtaacagtcttatga 1341
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 781 tatctcgtatgattgctcagtctcagaaccgagtgttcctgccaggtaacagtcttatga 840
Query: 1342 tcaatcttcaagatccctcct 1362
|||||||||||||||||||||
Sbjct: 841 tcaatcttcaagatccctcct 861
>BF01041A2E09
Length = 826
Score = 157 bits (79), Expect = 8e-38
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 1 aatggtaatttttatttggagctaaagtctattatttgtaaaagtattattggccacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 aatggtaatttttatttggagctaaagtctattatttgtaaaagtattattggccacaat 20
Query: 61 ttatgagcaaatcattgca 79
|||||||||||||||||||
Sbjct: 19 ttatgagcaaatcattgca 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 297,372
Number of extensions: 6997
Number of successful extensions: 6997
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6996
Number of HSP's successfully gapped: 2
Length of query: 1900
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1883
Effective length of database: 8,119,229
Effective search space: 15288508207
Effective search space used: 15288508207
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)