BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12025 (UTR included)
(2368 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2278_C1 1653 0.0
BF01027A2C04 666 0.0
>BF14_2278_C1
Length = 1051
Score = 1653 bits (834), Expect = 0.0
Identities = 837/838 (99%)
Strand = Plus / Plus
Query: 1168 tccacatgatacatctcctgatagccaccagggataaggcctgtccgcattgtgagatac 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tccacatgatacatctcctgatagccaccagggataaggcctgtccgcattgtgagatac 61
Query: 1228 tctgcctgggaacgtacctcaaaacctaccagtaccacagtaccgcggataagagaaaga 1287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tctgcctgggaacgtacctcaaaacctaccagtaccacagtaccgcggataagagaaaga 121
Query: 1288 agcaaatagcgctgagttacatacagcaggtgagggccgtcagtgaggagaggagaaggc 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agcaaatagcgctgagttacatacagcaggtgagggccgtcagtgaggagaggagaaggc 181
Query: 1348 gccaggagaactggaactaccaggtgtatcccaacctttacgggagcacccagaaggtgg 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gccaggagaactggaactaccaggtgtatcccaacctttacgggagcacccagaaggtgg 241
Query: 1408 aaataacgccctggcattccagcatgcacaacatggggttcgcgttcaacaggagcgtgt 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaataacgccctggcattccagcatgcacaacatggggttcgcgttcaacaggagcgtgt 301
Query: 1468 tccaggacatcgtgtccctccacgagcagttctgtgactacgacgactacaactgggact 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tccaggacatcgtgtccctccacgagcagttctgtgactacgacgactacaactgggact 361
Query: 1528 actcgctgctgcacctctcccagaaccggccggggagggacaagttcaaggtcatactgt 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actcgctgctgcacctctcccagaaccggccggggagggacaagttcaaggtcatactgt 421
Query: 1588 gcaagggcccgcgggtcttccatataggggagtgcggcatccaccacaagaagtccaact 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaagggcccgcgggtcttccatataggggagtgcggcatccaccacaagaagtccaact 481
Query: 1648 gtaacgcgtccgtggtgatcgggaaagtgcagaagctgctgctggaggccaggccgcacc 1707
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcaacgcgtccgtggtgatcgggaaagtgcagaagctgctgctggaggccaggccgcacc 541
Query: 1708 tgttccccgccagggtcaccgccaccatcagctcgggcggggccaagcacaacaagaaac 1767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgttccccgccagggtcaccgccaccatcagctcgggcggggccaagcacaacaagaaac 601
Query: 1768 tcaccaaggggaatggcggctggggggacctcagagaccgcgagctctgctccaacatga 1827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tcaccaaggggaatggcggctggggggacctcagagaccgcgagctctgctccaacatga 661
Query: 1828 cgagggtcggcagacagatgaagaagtacttttatgcgtaaccaaatatatataagccgt 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cgagggtcggcagacagatgaagaagtacttttatgcgtaaccaaatatatataagccgt 721
Query: 1888 ccctctcgcacactgggcgtcagagcgagacgggtgtatcgtacttaacacacgcgcgca 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ccctctcgcacactgggcgtcagagcgagacgggtgtatcgtacttaacacacgcgcgca 781
Query: 1948 cacttacactatatcgctgtccctttcacacatccgttgttcctctcactcactcaga 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 cacttacactatatcgctgtccctttcacacatccgttgttcctctcactcactcaga 839
>BF01027A2C04
Length = 786
Score = 666 bits (336), Expect = 0.0
Identities = 364/375 (97%)
Strand = Plus / Plus
Query: 492 gaggagttgatgaattccaacgacacctccgagcaggtcctcgcgttggtgcccccggag 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaggagttgatgaattccaacgacacctccgagcaggtcctcgcgttggtgcccccggag 471
Query: 552 ctacacaagtatctcaccgtccattcaaaaaatactactggtaactcaacagagcgctac 611
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 472 ctacacaagtatctcaccgtccattcaaaaaatactaccggtaactcaacagagcgctac 531
Query: 612 ggcccaaagaatatcacggagatgcggagagccatagacaggatgaacgacgcgcagacg 671
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggcccgaagaatatcacggagatgcggagagccatagacaggatgaacgacgcgcagacg 591
Query: 672 atatacaacgaagatatatttggtccggtacaaaacgacaccatcatcatagcgatacag 731
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 592 atatacaacgaagatatatttggaccggtacaaaacgacaccatcatcatagcgatacag 651
Query: 732 gttcacaccagactaacttacctcagacatctcatcgtatcgttggcccaggcccgtgat 791
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 652 gttcacaccagactaacttacctcagacatctcatcgtatcgttggcgcnnnnncgtgat 711
Query: 792 atcgacaagacgctcctcatcttctcccacgactactacgacgaggagatcaacagtcta 851
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 712 atcgacaaggcgctcctcatcttctcccacgactattacgacgaggagatcaacagtcta 771
Query: 852 gtgagaagtatcgac 866
|||||||||||||||
Sbjct: 772 gtgagaagtatcgac 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,521
Number of extensions: 4012
Number of successful extensions: 4012
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4011
Number of HSP's successfully gapped: 2
Length of query: 2368
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2351
Effective length of database: 8,119,229
Effective search space: 19088307379
Effective search space used: 19088307379
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)