BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12039 (UTR included)
(2299 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B2G08 1388 0.0
>BF01049B2G08
Length = 792
Score = 1388 bits (700), Expect = 0.0
Identities = 717/724 (99%)
Strand = Plus / Plus
Query: 1 aaatctttgatagccacatcataacagataacagtgaagctttgtatacagtttctggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 aaatctttgatagccacatcataacagataacagtgaagctttgtatacagtttctggat 84
Query: 61 tatgttcgtctaactcagcatatacaagaagagttcttgtaaacgaaatagaaaagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tatgttcgtctaactcagcatatacaagaagagttcttgtaaacgaaatagaaaagagag 144
Query: 121 acttactggtcaacaaaacaattttaacagaattcagcaaagtcaaagataaattgcaag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 acttactggttaacaaaacaattttaacagaattcagcaaagtcaaagataaattgcaag 204
Query: 181 gattaattgattccctaaattctttagatgtttcagttcaagacatgtccaataggctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gattaattgattccctaaattctttagatgtttcagttcaagacatgtccaataggctcc 264
Query: 241 aggaatcaaaaacaaaaacccatcacatcattgctcgaacaacaaaactcaaggatgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggaatcaaaaacaaaaacccatcacatcattgctcgaacaacaaaactcaaggatgaga 324
Query: 301 gaataagaaccaaaaagaaattactttgggttaatacttttgtgaataattttaatttat 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 gaataagaaccaaaaagaaattactttgggttaataattttgtgaataattttaatttat 384
Query: 361 caccggataaaataagaagtctttttaatgtttcaccattaacaaatgactttttttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caccggataaaataagaagtctttttaatgtttcaccattaacaaatgactttttttctt 444
Query: 421 cattgtctgatattgaaaaacttaataataattgcagaacacttgtccgatgttggtatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattgtctgatattgaaaaacttaataataattgcagaacacttgtccgatgttggtatc 504
Query: 481 aaacaccagcatttgatattatggaaaccataggtctccaacaggaggcagctattgaaa 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 505 aaacaccagcatttgatattatggaaaccataggtctccaacaggaagcagctattgaaa 564
Query: 541 aattgtatcattggacaattggagcttgccttattgttgattctccaaataatgctctcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aattgtatcattggacaattggagcttgccttattgttgattctccaaataatgctctcg 624
Query: 601 tacctaaagctttggcaaaatttgaaaataggcaagttctttttggcaacataatagatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tacctaaagctttggcaaaatttgaaaataggcaagttctttttggcaacataatagatg 684
Query: 661 agtactgcaatgcaagaaaagcaattgttgtacaactgttcattgatgctttgactaaag 720
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtactgcaatgcaannnnagcaattgttgtacaactgttcattgatgctttgactaaag 744
Query: 721 aaga 724
||||
Sbjct: 745 aaga 748
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 327,816
Number of extensions: 6427
Number of successful extensions: 6427
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6426
Number of HSP's successfully gapped: 1
Length of query: 2299
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2282
Effective length of database: 8,119,229
Effective search space: 18528080578
Effective search space used: 18528080578
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)