BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12054 (UTR included)
(3136 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044B1F04 1039 0.0
BF01017A1F02 726 0.0
>BF01044B1F04
Length = 720
Score = 1039 bits (524), Expect = 0.0
Identities = 555/566 (98%)
Strand = Plus / Plus
Query: 1800 agattgtcggagcgaacgttctctctatggggctatatggcgagtcacctcaatgagtac 1859
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 155 agattgtcggagcgcacgttctcactatggggctatatggcgagtcacctcaatgagtac 214
Query: 1860 aagaatccactgtacaatcccaaagcctaccccgacatattgaaacctgacttgagcgct 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 aagaatccactgtacaatcccaaagcctaccccgacatattgaaacctgacttgagcgct 274
Query: 1920 cagagtatcaggttctggcgcggtatgtattgtcgccatgagagcggtgtccatcctcgg 1979
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cagagtatcaggttctggcgcggtatgtattgtcgccatgagagcggtgtccatcctcgt 334
Query: 1980 gagtctctggcagacctgctgccggccgccgtacaccacgccaccgccctgactcatcac 2039
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagtctctggcggacctgctgccggccgccgtacaccacgccaccgccctgactcatcac 394
Query: 2040 atagattacctggctaagaggatatcgacgttcaaaaaccttttatccggacggaaagag 2099
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 395 atagattacctggctaagaggatatcgacgttcaaaaaccttttatccggacggaaggag 454
Query: 2100 agaaaagatgacaccgtcgtgaactatcagaacggatcctcggacaccgtggacattgag 2159
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agaaaagacgacaccgtcgtgaactatcagaacggatcctcggacaccgtggacattgag 514
Query: 2160 accaagatggaggctgcggagattgataataaacttcactacgagtccggcggcaaccta 2219
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 515 accaagatggaggctgcggagattgataataaacttcactacgagtccggcggcaatcta 574
Query: 2220 tcagagctggagtgcgctaaccacgaccacccactgaaggaaggagctcccaaaataata 2279
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 575 tcagagctggagtgcgctaaccacgaccatccactgaaggagggagctcccaaaataata 634
Query: 2280 ccgctcataacagagaaggcagacgccatgatacccgcgaccctgagcctgctagaggct 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ccgctcataacagagaaggcagacgccatgatacccgcgaccctgagcctgctagaggct 694
Query: 2340 gagatcagcacagtggcactcgactg 2365
| |||||||||||||||||||||||
Sbjct: 695 gnnatcagcacagtggcactcgactg 720
>BF01017A1F02
Length = 676
Score = 726 bits (366), Expect = 0.0
Identities = 375/378 (99%)
Strand = Plus / Plus
Query: 484 agctggagaacgtccagatgctggataaatacaatcttaggaatccatcaaaaggcacgc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agctggagaacgtccagatgctggataaatacaatcttaggaatccatcaaaaggcacgc 358
Query: 544 tgtactttgcaacaactcacctcatattcgttgatcatgaaatgagaaaggaaacttgga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgtactttgcaacaactcacctcatattcgttgatcatgaaatgagaaaggaaacttgga 418
Query: 604 tacttctaatgcacatatcaacagtggaacgtttgccgatcacaacgacgggctcgcctc 663
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 419 tacttctaatgcacatatcaacagtggaacgtttgccgatcacaacgacggggtcgccgc 478
Query: 664 tgttagttcgcactaagaccttccaatctgtgttctttgttataccgagagaacgggact 723
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tattagttcgcactaagaccttccaatctgtgttctttgttataccgagagaacgggact 538
Query: 724 gtcacgagatgcaccagaccctgctgaggttaagtcaaccggttaacctggaagagctat 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gtcacgagatgcaccagaccctgctgaggttaagtcaaccggttaacctggaagagctat 598
Query: 784 actgcttccattacaagtctactccggacgaccttcccaagtcagctggttggaatttct 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 actgcttccattacaagtctactccggacgaccttcccaagtcagctggttggaatttct 658
Query: 844 tcgacatacagacagagt 861
||||||||||||||||||
Sbjct: 659 tcgacatacagacagagt 676
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 383,398
Number of extensions: 9203
Number of successful extensions: 9203
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9203
Number of HSP's successfully gapped: 2
Length of query: 3136
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3118
Effective length of database: 8,109,745
Effective search space: 25286184910
Effective search space used: 25286184910
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)