BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12061 (UTR included)
(1388 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1D11 1400 0.0
BF01058A1C08 595 e-170
BF01019B1D07 323 4e-88
>BF01034A1D11
Length = 796
Score = 1400 bits (706), Expect = 0.0
Identities = 745/759 (98%)
Strand = Plus / Plus
Query: 447 ggctatagagcagctgggcggcttagaactggaatctgattacccttacgagggcgagaa 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ggctatagagcagctgggcggcttagaactggaatctgattacccttacgagggcgagaa 97
Query: 507 cgacaagtgcgtgttcaacaaaacgatgtccaaggtccagatcagcggcgccgttaatat 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 cgacaagtgcgtgttcaacaaaacgatgtccaaggtccagatcagcggcgccgttaatat 157
Query: 567 atcgtccaacgaaacagatatggctaaatggctcacacagaacggacccatctctattgg 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atcgtccaacgaaacagatatggctaaatggctcacacagaacggacccatctctattgg 217
Query: 627 tataaacgctaatgcgatgcagttctacatggggggtatctcacacccgtggaaggtcct 686
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tataaacgcgaatgcgatgcagttctacatggggggtatctcacacccgtggaaggtcct 277
Query: 687 ctgtaaccccaccaacttggaccacggcgtacttatagtgggctacggagttaagaacta 746
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgcaaccccaccaacttggatcacggcgtacttatagtgggctacggagttaagaacta 337
Query: 747 ccctctcttccacaagcgtctgccctactggattgtgaagaattcgtggggaaagtcgtg 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ccctctcttccacaagcgtctgccctactggattgtgaagaattcgtggggaaagtcgtg 397
Query: 807 gggcgagcagggctactaccgggtgtaccgaggcgacggcacttgcggcgtcaatcaaat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gggcgagcagggctactaccgggtgtaccgaggcgacggcacttgcggcgtcaatcaaat 457
Query: 867 ggccagctccgccgtcatatagccttggcctataacatgtagctgaaacagctgacacgg 926
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 458 ggccagctccgccgtcatatagccttggcctataacatgtagttgaaacagctgacacgg 517
Query: 927 ggagtgttaatgtaaaaaatgactttaaaaaaaatacatcgaaatattatagtaacttat 986
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ggagtgttagtgtaaaaaatgactttaaaaaaaatacatcgaaatattatagtaacttat 577
Query: 987 aataatattttgcaggcacttgttatgggtaaacttcttatgattttatacttccctggg 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aataatattttgcaggcacttgttatgggtaaacttcttatgattttatacttccctggg 637
Query: 1047 tcggacctcccttccatggttctgtctcgtcctgtttaggctcgagcgtaaagtcctctt 1106
||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct: 638 tcggacctcccttccttggttctgtctgatcctgtttaagctcgagtgtaaagtcctctt 697
Query: 1107 gtaaaagttaacctctgaaactcgtgaaccattatgtatataaactaaacgtttattagt 1166
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gtaaaagttaatctctgnnnctcgtgaaccattatgtatataaactaaacgtttattagt 757
Query: 1167 aataatcactcttataatattgatgaacttttattgcca 1205
|||||||||||||||||||||||||||||||||||||||
Sbjct: 758 aataatcactcttataatattgatgaacttttattgcca 796
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 1314 taaagtcctcttgtaaaagttaatctctgaaactcatgaacatttatgtatataaactaa 1373
||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 686 taaagtcctcttgtaaaagttaatctctgnnnctcgtgaaccattatgtatataaactaa 745
Query: 1374 acgtatattagtaat 1388
|||| ||||||||||
Sbjct: 746 acgtttattagtaat 760
>BF01058A1C08
Length = 783
Score = 595 bits (300), Expect = e-170
Identities = 396/429 (92%), Gaps = 18/429 (4%)
Strand = Plus / Plus
Query: 885 atagccttggcctataacatgtagctgaaacagctgacacggggagtgttaatgtaaaaa 944
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1 atagccttggcctataacatgtagctgaaacagctgacacggagagtgttaatctaaaaa 60
Query: 945 atgactttaaaaaaaatacatcgaaatattatagtaacttataataatattttgcaggca 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgactttaaaaaaaatacatcgaaatattatagtaacttataataatattttgcaggca 120
Query: 1005 cttgttatgggtaaacttcttatgattttatacttccctgggtcggacctcccttccatg 1064
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 121 cttgttatgggtaaacttcttatgattttatacttccctgggtcggatctcccttccttg 180
Query: 1065 gttctgtctcgtcctgtttaggctcgagcgtaaagtcctcttgtaaaagttaacctctga 1124
|||||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 181 gttctgtctcgtcctgttta---------gtaaa--------gtaaaagttaatctctga 223
Query: 1125 aactcgtgaaccattatgtatataaactaaacgtttattagtaataatcactcttataat 1184
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 224 aactcgtgaaccattatgtatacaaactaaacgtttattagtaataattactcttataat 283
Query: 1185 attgatgaacttttattgccagggtatat-ccccccagggtagcgcacgacgggcgacag 1243
||||||||||| ||||||||||||| ||| |||||| |||||||||||||||| |||||
Sbjct: 284 attgatgaactcttattgccagggtgtatcccccccggggtagcgcacgacggctgacag 343
Query: 1244 acgagtcttccgttctcagcataataataatatattttattatatatggcactaaaatgc 1303
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 344 acgtgtcttccgttctcagaataataataatatattttattatatatggcactaaaaagc 403
Query: 1304 tttgatatg 1312
|||||||||
Sbjct: 404 tttgatatg 412
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1326 gtaaaagttaatctctgaaactcatgaacatttatgtatataaactaaacgtatattagt 1385
||||||||||||||||||||||| ||||| ||||||||| ||||||||||| |||||||
Sbjct: 206 gtaaaagttaatctctgaaactcgtgaaccattatgtatacaaactaaacgtttattagt 265
Query: 1386 aat 1388
|||
Sbjct: 266 aat 268
>BF01019B1D07
Length = 595
Score = 323 bits (163), Expect = 4e-88
Identities = 163/163 (100%)
Strand = Plus / Plus
Query: 285 ggtaatatagaaggtcagtataagatccagaacgacgagctggtctctctgtcggagcaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggtaatatagaaggtcagtataagatccagaacgacgagctggtctctctgtcggagcaa 259
Query: 345 gaattggtagactgtgacaaactggacgacggctgcaacggaggcctcccagacaacgcc 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaattggtagactgtgacaaactggacgacggctgcaacggaggcctcccagacaacgcc 319
Query: 405 tacaggtactattttatctaagcttttcaagataacgatgacg 447
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacaggtactattttatctaagcttttcaagataacgatgacg 362
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,961
Number of extensions: 5034
Number of successful extensions: 5034
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5033
Number of HSP's successfully gapped: 6
Length of query: 1388
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1371
Effective length of database: 8,119,229
Effective search space: 11131462959
Effective search space used: 11131462959
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)