BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12080 (UTR included)
(1687 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 222 1e-57
BF01060B1D11 194 3e-49
>BF01047B2H03
Length = 758
Score = 222 bits (112), Expect = 1e-57
Identities = 256/303 (84%), Gaps = 7/303 (2%)
Strand = Plus / Minus
Query: 85 gtctaaaaaggccattggagttctataaacacctgagagtttccaaaagatatttcctgg 144
||||||||||||||| |||| ||||||||||| | ||||||||||| ||| || ||| ||
Sbjct: 753 gtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatatcccgg 694
Query: 145 gggaaccccattataaagtcgttacatcgctcccaaaagagaaagatgccccagagctag 204
|| || ||||| || | ||| ||||||| ||| ||||| | | ||||||||| || |||
Sbjct: 693 ggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctgaactaa 634
Query: 205 agtcaagacttcatttccattagcagtatatgagaggagcacaaagtaac-acagtagag 263
||||||||||||| |||||| | |||| ||||| |||||||||||||||| | |||||
Sbjct: 633 agtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagagtagga 574
Query: 264 ttaggatcaagtaagaaggccaaagatacggatattctcgtattaaagtcttttattcgg 323
||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||
Sbjct: 573 ttaggatcaaggaagaaggcccaagatacggata------tattgaagtcttttattcgg 520
Query: 324 caagacgagaatgagaaatataagatccctgcaatgagtttacagatgcagaacgagtgg 383
|||||||||||||| |||||| |||| ||||||||||||| | |||||||||||||||
Sbjct: 519 caagacgagaatgatggatataacatccatgcaatgagtttagatatgcagaacgagtgg 460
Query: 384 tta 386
|||
Sbjct: 459 tta 457
Score = 149 bits (75), Expect = 2e-35
Identities = 202/243 (83%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 523 cttgctatatgtgtgagaaggcagttggaactgctaagcatttgcttgtgggatataggg 582
|||||||||| || ||| |||||||||||| |||| |||||||||| |||||| ||||
Sbjct: 363 cttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtaggc 304
Query: 583 tactcctggatagcggtcaatactcgcg-tcgtcacgatagagttctggaaatcatacgt 641
|||||||||||||||||||||||| || || || ||||| ||| | | |||||| |
Sbjct: 303 tactcctggatagcggtcaatactaccggtctccatgatagggttttaaatttcatacat 244
Query: 642 gaagcagttattctttcggtagccagagcgcaaagggaaataaccataaacgagcgatta 701
||||| |||| | ||| ||||| || ||| ||| |||||||||| ||||| |||||||
Sbjct: 243 gaagcggttagtattttggtagtcattgcggaaaaagaaataaccacaaacgggcgatta 184
Query: 702 atgggttttgtgagagaaggcactagggctacaaaatcaaacgtcacgccttactctatc 761
|| |||||||||||||||| || |||||||| ||| |||||| ||| |||||||||||||
Sbjct: 183 attggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatc 124
Query: 762 ctt 764
|||
Sbjct: 123 ctt 121
>BF01060B1D11
Length = 799
Score = 194 bits (98), Expect = 3e-49
Identities = 273/329 (82%), Gaps = 8/329 (2%)
Strand = Plus / Minus
Query: 60 agggatcgcaatagttttggaatgggtctaaaaaggccattggagttctataaacacctg 119
|||||||||||||||||||| ||| ||||||||||||||| |||| ||||||||||| |
Sbjct: 607 agggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacactta 548
Query: 120 agagtttccaaaagatatttcctgggggaaccccattataaagtcgttacatcgctccca 179
||||||||||| ||| || ||| |||| || ||||| || | ||| ||||||| ||||||
Sbjct: 547 agagtttccaagagacatatcccggggaaagcccataatgatgtcattacatcactccca 488
Query: 180 aaagagaaagatgccccagagctagagtc-aagacttcatttccattagcagtatatgag 238
||| ||||| |||||| ||| |||| |||||||| ||||| | |||| |||||
Sbjct: 487 aaaaccggagatggcccagaactaaagtctgagacttcaattccacaaacagtttatgat 428
Query: 239 aggagcacaaagtaac-acagtagagttaggatcaagtaagaaggccaaagatacggata 297
|||||||||||||||| | ||||| ||||||||||| |||||||| |||||| |||||
Sbjct: 427 aggagcacaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatggata 368
Query: 298 ttctcgtattaaagtcttttattcggcaagacgagaatgagaaatataagatccctgcaa 357
|||| |||| |||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 367 ------tattgaagtattttattcagcaagacgagaatgatggatataagatccatgcaa 314
Query: 358 tgagtttacagatgcagaacgagtggtta 386
|| ||||| ||||||||||||||||||||
Sbjct: 313 tgcgtttagagatgcagaacgagtggtta 285
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 503 gggtaaaggtaccgaaaaatcttgctatatgtgtgagaaggcagttggaactgctaagca 562
|||||||| |||||||||| |||||||||| || |||||||||||||||| |||||||||
Sbjct: 202 gggtaaagataccgaaaaaacttgctatatttgcgagaaggcagttggaattgctaagca 143
Query: 563 tttgcttgtgggatatagggtact 586
|||||| |||||| |||| ||||
Sbjct: 142 tttgctgatgggatgtaggctact 119
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,485
Number of extensions: 3090
Number of successful extensions: 3090
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3089
Number of HSP's successfully gapped: 7
Length of query: 1687
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1670
Effective length of database: 8,119,229
Effective search space: 13559112430
Effective search space used: 13559112430
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)