BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN12088 (UTR included)
(2968 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061A1E11 1622 0.0
>BF01061A1E11
Length = 857
Score = 1622 bits (818), Expect = 0.0
Identities = 847/857 (98%)
Strand = Plus / Plus
Query: 1574 ggaacaccctgaactgtctctgcggtgtcacatgtgtgagaaggtgttcgcaaccttgaa 1633
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaacaccctnaactgtctctgcggtgtcacatgtgtgagaaggtgttcgcaaccttgaa 60
Query: 1634 gtcagcgagccggcaccgatccacgtgttcgttggtggagcgtcttttctcgtgttcttc 1693
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61 gtcagcgagccggcaccgatccacgtgttcgttggtggagcgtctcttctcgtgttcttc 120
Query: 1694 ttgcggcatgaggttcgcgcacgaggttactctcaacaaacacatcctgagagctcacgc 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgcggcatgaggttcgcgcacgaggttactctcaacaaacacatcctgagagctcacgc 180
Query: 1754 cggtcagagcgtgtcagtcaggttcatggacaggggagcgccaccacaatacaagtgtga 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggtcagagcgtgtcagtcaggttcatggacaggggagcgccaccacaatacaagtgtga 240
Query: 1814 cacgtgcaacagacggtttcagaggaaagatctgctaacaaggcattctaagatacataa 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacgtgcaacagacggtttcagaggaaagatctgctaacaaggcattctaagatacataa 300
Query: 1874 aaattctgacaaattttttgaatgtgatgtctgcaaaaagaaatttcatagaagagataa 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaattctgacaaattttttgaatgtgatgtctgcaaaaagaaatttcatagaagagataa 360
Query: 1934 tctaagagcccacgtccgtattcacgacggcaccagttcgtcagccggttcaagcgcctg 1993
|||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 361 tctaagagcccacgtccgtattcatgatggcaccagttcgtcggccggttcaagcgcctg 420
Query: 1994 cctctgtctctactgcggcagaagtttctcaaattcctctaatctcatagttcatatgcg 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctctgtctctactgcggcagaagtttctcaaattcctctaatctcatagttcatatgcg 480
Query: 2054 tcgacataccggtgagaagccatacaagtgcgacttctgcgggaaagggttcccgcgttc 2113
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 tcggcataccggtgagaagccatacaagtgcgacttctgcgggaaagggttcccacgttc 540
Query: 2114 gtctgacctccagtgtcaccgacgatctcataccggcgagaaaccttgcatatgcggagt 2173
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtctgatctccagtgtcaccgacgatctcataccggcgagaaaccttgcatatgcggagt 600
Query: 2174 gtgtggaaaagccttctcccggagcaataagctgtcgcgtcacatgcgtgtacacacggg 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgtggaaaagccttctcccggagcaataagctgtcgcgtcacatgcgtgtacacacggg 660
Query: 2234 agtcaagccgtacaagtgttcttattgcgagaaggcgttctcacagagcaacgatctaac 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtcaagccgtacaagtgttcttattgcgagaaggcgttctcacagagcaacgatctaac 720
Query: 2294 gctacatgtccggcgacacacaggcgataaaccttacgtctgtgaattatgtggggatcg 2353
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctacacgtccggcgacacacgggcgataaaccttacgtctgtgaattatgtggggatcg 780
Query: 2354 ctttatacagggtacagctcttcataatcaccgtcgcgcccatggtcacttcccgccatc 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctttatacagggtacagctcttcataatcaccgtcgcgcccatggtcacttcccgccatc 840
Query: 2414 gacccaaccgttgcctc 2430
|||||||||||||||||
Sbjct: 841 gacccaaccgttgcctc 857
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 401,941
Number of extensions: 8796
Number of successful extensions: 8796
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8796
Number of HSP's successfully gapped: 1
Length of query: 2968
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2950
Effective length of database: 8,109,745
Effective search space: 23923747750
Effective search space used: 23923747750
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)